Vigna umbellata (vigna_umbellata)
Imported from atlas release summary for Vigna umbellata.
1856
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1856
Candidate Genes
BAHD
6.43%
C3'H/CYP98A
5.49%
C4H
5.03%
POD
4.54%
4CL
4.29%
UGT
3.9%
7DLGT
3.67%
UFGT
3.64%
Other Families
63.02%
More Families (97)
CYP76
152
3.5%
IFS
150
3.46%
F3H
149
3.44%
T3O
136
3.14%
NMT
125
2.88%
DWF4/CYP90B1
97
2.24%
F3'H/CYP75B
92
2.12%
STR
80
1.84%
CAD
80
1.84%
BR6OX2/CYP85A2
74
1.71%
H6H
73
1.68%
CODM/T6ODM
69
1.59%
TRI/TRII
67
1.54%
SMT1/SMT2/SMT3
66
1.52%
CYP71
57
1.31%
SGD
53
1.22%
ANR
50
1.15%
CAS
48
1.11%
IFR
44
1.01%
HCT
41
0.95%
GS
39
0.9%
LAC
39
0.9%
BBE
36
0.83%
CSE
36
0.83%
RAS
36
0.83%
PYKS
35
0.81%
CYP90D1
35
0.81%
PAL
33
0.76%
COMT
32
0.74%
CCR
31
0.71%
PMT
28
0.65%
G8O/G8H
26
0.6%
GES
25
0.58%
COR
25
0.58%
TPS
25
0.58%
7DLH
24
0.55%
NCS
23
0.53%
IO
23
0.53%
SLS
23
0.53%
F5H/CYP84A
23
0.53%
TAT
21
0.48%
T16H
20
0.46%
FNS
20
0.46%
16OMT
18
0.42%
8HGO
16
0.37%
LAMT
16
0.37%
ROT3/CYP90C1
16
0.37%
BR6OX1/CYP85A1
14
0.32%
DET2
14
0.32%
MPO
13
0.3%
TDC
13
0.3%
DFR
13
0.3%
CPD/CYP90A1
13
0.3%
SQE
13
0.3%
CNMT
12
0.28%
CHS
12
0.28%
CYP51G1
12
0.28%
F3'5'H/CYP75A
11
0.25%
HPPR
10
0.23%
SQS/FDFT1
10
0.23%
CYP80B1
9
0.21%
CCoAOMT
9
0.21%
AACT
9
0.21%
CPR
8
0.18%
FPPS
8
0.18%
DXS
8
0.18%
CYP719
7
0.16%
HMGR
7
0.16%
GGPPS
7
0.16%
SMO1/SMO2
6
0.14%
MVD
6
0.14%
ISY
5
0.12%
ANS/LDOX
5
0.12%
MCT/IspD
5
0.12%
MVK
5
0.12%
CHI
4
0.09%
HMGS
4
0.09%
TYDC_DDC
3
0.07%
DWF1
3
0.07%
DWF7
3
0.07%
CMK/IspE
3
0.07%
6OMT_4OMT_SOMT
2
0.05%
FLS
2
0.05%
CPI1
2
0.05%
HYD1
2
0.05%
PMK
2
0.05%
DXR
2
0.05%
XMT_MXMT_DXMT
1
0.02%
ODC
1
0.02%
ADC
1
0.02%
CYP80F1
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
MDS/IspF
1
0.02%
HDR/IspH
1
0.02%
IDI
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 518 | 19 | BAHD (228) | View species results |
| Alkaloid pathway | 438 | 19 | 7DLGT (70) | View species results |
| Phenylpropanoid pathway | 394 | 11 | POD (185) | View species results |
| Flavonoid pathway | 235 | 8 | UFGT (150) | View species results |
| Rosmarinic acid pathway | 159 | 7 | C4H (68) | View species results |
| Steroid pathway | 112 | 12 | CAS (42) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1471 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 356 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| vigna_umbellata_XP_047147820.1 | Alkaloid | PMT | low | borderline |
| vigna_umbellata_XP_047147978.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047151501.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047153217.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047153218.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047153225.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047153226.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047153227.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047153228.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047153244.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047154278.1 | Alkaloid | PMT | low | borderline |
| vigna_umbellata_XP_047159171.1 | Alkaloid | PMT | medium | borderline |
| vigna_umbellata_XP_047160345.1 | Alkaloid | PMT | low | borderline |
| vigna_umbellata_XP_047164823.1 | Alkaloid | PMT | low | borderline |
| vigna_umbellata_XP_047164827.1 | Alkaloid | PMT | low | borderline |
| vigna_umbellata_XP_047165218.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047166887.1 | Alkaloid | PMT | low | borderline |
| vigna_umbellata_XP_047171249.1 | Alkaloid | PMT | medium | borderline |
| vigna_umbellata_XP_047171996.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047172292.1 | Alkaloid | PMT | low | borderline |
| vigna_umbellata_XP_047172332.1 | Alkaloid | PMT | medium | borderline |
| vigna_umbellata_XP_047174017.1 | Alkaloid | PMT | medium | borderline |
| vigna_umbellata_XP_047175931.1 | Alkaloid | PMT | low | borderline |
| vigna_umbellata_XP_047175951.1 | Alkaloid | PMT | low | borderline |
| vigna_umbellata_XP_047179067.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047179966.1 | Alkaloid | PMT | medium | pass |
| vigna_umbellata_XP_047181973.1 | Alkaloid | PMT | low | borderline |
| vigna_umbellata_XP_047181980.1 | Alkaloid | PMT | low | borderline |