PlantSME Plant secondary metabolism enzyme database

Zizania palustris (zizania_palustris)

Imported from atlas release summary for Zizania palustris.

2011
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 553 20 BAHD (245) View species results
Phenylpropanoid pathway 485 11 POD (238) View species results
Alkaloid pathway 411 24 NMT (78) View species results
Flavonoid pathway 242 11 UFGT (123) View species results
Rosmarinic acid pathway 166 7 C4H (63) View species results
Steroid pathway 154 14 SMT1/SMT2/SMT3 (64) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1504 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 414 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
KAG8039425.1[Zizania Alkaloid IO medium borderline
KAG8045774.1[Zizania Alkaloid IO medium borderline
KAG8047129.1[Zizania Alkaloid IO medium borderline
KAG8048248.1[Zizania Alkaloid IO medium pass
KAG8048257.1[Zizania Alkaloid IO medium pass
KAG8049093.1[Zizania Alkaloid IO medium borderline
KAG8050043.1[Zizania Alkaloid IO medium borderline
KAG8057505.1[Zizania Alkaloid IO medium borderline
KAG8061746.1[Zizania Alkaloid IO low borderline
KAG8062385.1[Zizania Alkaloid IO medium borderline
KAG8062719.1[Zizania Alkaloid IO medium pass
KAG8062720.1[Zizania Alkaloid IO low borderline
KAG8065854.1[Zizania Alkaloid IO low borderline
KAG8067715.1[Zizania Alkaloid IO medium borderline
KAG8067737.1[Zizania Alkaloid IO medium borderline
KAG8070651.1[Zizania Alkaloid IO medium borderline
KAG8074878.1[Zizania Alkaloid IO medium borderline
KAG8082797.1[Zizania Alkaloid IO medium borderline
KAG8085160.1[Zizania Alkaloid IO medium borderline
KAG8085624.1[Zizania Alkaloid IO medium pass
KAG8086098.1[Zizania Alkaloid IO medium borderline
KAG8087740.1[Zizania Alkaloid IO medium borderline
KAG8096772.1[Zizania Alkaloid IO medium borderline
KAG8097371.1[Zizania Alkaloid IO medium borderline
KAG8098936.1[Zizania Alkaloid IO medium borderline
KAG8098939.1[Zizania Alkaloid IO medium pass