Zizania palustris (zizania_palustris)
Imported from atlas release summary for Zizania palustris.
2011
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2011
Candidate Genes
BAHD
7.25%
POD
5.79%
C3'H/CYP98A
5.34%
C4H
4.63%
4CL
4.31%
UGT
3.24%
NMT
3.09%
IFS
3.0%
Other Families
63.36%
More Families (98)
UFGT
133
2.85%
7DLGT
131
2.81%
CYP76
125
2.68%
T3O
121
2.59%
STR
110
2.36%
SMT1/SMT2/SMT3
107
2.29%
DWF4/CYP90B1
106
2.27%
F3H
100
2.14%
F3'H/CYP75B
95
2.04%
BR6OX2/CYP85A2
80
1.72%
CAD
76
1.63%
CYP71
65
1.39%
CSE
63
1.35%
CAS
61
1.31%
IFR
59
1.27%
GES
57
1.22%
TPS
57
1.22%
CODM/T6ODM
51
1.09%
PYKS
49
1.05%
GS
48
1.03%
CCR
48
1.03%
SGD
46
0.99%
H6H
45
0.96%
ANR
45
0.96%
PAL
45
0.96%
RAS
44
0.94%
LAC
43
0.92%
PMT
40
0.86%
SLS
37
0.79%
T16H
34
0.73%
TRI/TRII
33
0.71%
8HGO
32
0.69%
G8O/G8H
32
0.69%
HCT
32
0.69%
CYP90D1
32
0.69%
NCS
31
0.66%
COMT
29
0.62%
16OMT
27
0.58%
IO
26
0.56%
7DLH
26
0.56%
DFR
26
0.56%
CHS
23
0.49%
CPD/CYP90A1
23
0.49%
FNS
22
0.47%
COR
21
0.45%
F3'5'H/CYP75A
21
0.45%
CNMT
18
0.39%
TAT
18
0.39%
CYP51G1
18
0.39%
CPR
17
0.36%
BR6OX1/CYP85A1
17
0.36%
BBE
16
0.34%
CCoAOMT
16
0.34%
LAMT
14
0.3%
SQS/FDFT1
14
0.3%
FPPS
14
0.3%
F5H/CYP84A
13
0.28%
AACT
12
0.26%
CYP719
11
0.24%
CHI
11
0.24%
MCT/IspD
11
0.24%
MVK
10
0.21%
HMGR
10
0.21%
GGPPS
10
0.21%
ANS/LDOX
9
0.19%
HMGS
9
0.19%
TDC
8
0.17%
CYP80B1
8
0.17%
HPPR
8
0.17%
ROT3/CYP90C1
8
0.17%
MVD
8
0.17%
TYDC_DDC
7
0.15%
XMT_MXMT_DXMT
7
0.15%
DWF1
6
0.13%
SMO1/SMO2
6
0.13%
DXS
6
0.13%
DET2
5
0.11%
SQE
5
0.11%
MDS/IspF
5
0.11%
IDI
5
0.11%
6OMT_4OMT_SOMT
4
0.09%
MPO
4
0.09%
HDS/IspG
4
0.09%
ADC
3
0.06%
DXR
3
0.06%
CMK/IspE
3
0.06%
ODC
2
0.04%
FLS
2
0.04%
FK
2
0.04%
HYD1
2
0.04%
CPI1
2
0.04%
ISY
1
0.02%
CYP80F1
1
0.02%
DWF7
1
0.02%
DWF5
1
0.02%
GPPS
1
0.02%
PMK
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 553 | 20 | BAHD (245) | View species results |
| Phenylpropanoid pathway | 485 | 11 | POD (238) | View species results |
| Alkaloid pathway | 411 | 24 | NMT (78) | View species results |
| Flavonoid pathway | 242 | 11 | UFGT (123) | View species results |
| Rosmarinic acid pathway | 166 | 7 | C4H (63) | View species results |
| Steroid pathway | 154 | 14 | SMT1/SMT2/SMT3 (64) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1504 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 414 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| KAG8036301.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8044123.1[Zizania | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG8045866.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8046171.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8046966.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8046967.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8046991.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8048141.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8048144.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8048147.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8049558.1[Zizania | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG8049909.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8051397.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8051399.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8051401.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8051402.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8052246.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8053213.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8053220.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8054530.1[Zizania | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG8054533.1[Zizania | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG8054536.1[Zizania | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG8054537.1[Zizania | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG8054827.1[Zizania | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8056207.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8056458.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8056460.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8056465.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8056583.1[Zizania | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG8057098.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8060959.1[Zizania | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8062612.1[Zizania | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| KAG8063803.1[Zizania | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064061.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064062.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064063.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064064.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064065.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064066.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064067.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064068.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064236.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064237.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064238.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8064239.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8066856.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8066976.1[Zizania | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8066978.1[Zizania | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8067531.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| KAG8067532.1[Zizania | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |