PlantSME Plant secondary metabolism enzyme database
4CL

4CL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family 4CL.

Lineage Coverage
Detected in 774 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 25907 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 25910 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 25914 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
armoracia_rusticana_Arr33508 armoracia_rusticana armoracia_rusticana_Arr33508
armoracia_rusticana_Arr34205 armoracia_rusticana armoracia_rusticana_Arr34205
armoracia_rusticana_Arr35895 armoracia_rusticana armoracia_rusticana_Arr35895
armoracia_rusticana_Arr37518 armoracia_rusticana armoracia_rusticana_Arr37518
armoracia_rusticana_Arr39728 armoracia_rusticana armoracia_rusticana_Arr39728
armoracia_rusticana_Arr403 armoracia_rusticana armoracia_rusticana_Arr403
armoracia_rusticana_Arr40693 armoracia_rusticana armoracia_rusticana_Arr40693
armoracia_rusticana_Arr40704 armoracia_rusticana armoracia_rusticana_Arr40704
armoracia_rusticana_Arr41082 armoracia_rusticana armoracia_rusticana_Arr41082
armoracia_rusticana_Arr41083 armoracia_rusticana armoracia_rusticana_Arr41083
armoracia_rusticana_Arr41084 armoracia_rusticana armoracia_rusticana_Arr41084
armoracia_rusticana_Arr41218 armoracia_rusticana armoracia_rusticana_Arr41218
armoracia_rusticana_Arr4131 armoracia_rusticana armoracia_rusticana_Arr4131
armoracia_rusticana_Arr4132 armoracia_rusticana armoracia_rusticana_Arr4132
armoracia_rusticana_Arr4133 armoracia_rusticana armoracia_rusticana_Arr4133
armoracia_rusticana_Arr41391 armoracia_rusticana armoracia_rusticana_Arr41391
armoracia_rusticana_Arr41448 armoracia_rusticana armoracia_rusticana_Arr41448
armoracia_rusticana_Arr41786 armoracia_rusticana armoracia_rusticana_Arr41786
armoracia_rusticana_Arr41787 armoracia_rusticana armoracia_rusticana_Arr41787
armoracia_rusticana_Arr4198 armoracia_rusticana armoracia_rusticana_Arr4198
armoracia_rusticana_Arr4846 armoracia_rusticana armoracia_rusticana_Arr4846
armoracia_rusticana_Arr5120 armoracia_rusticana armoracia_rusticana_Arr5120
armoracia_rusticana_Arr5452 armoracia_rusticana armoracia_rusticana_Arr5452
armoracia_rusticana_Arr5678 armoracia_rusticana armoracia_rusticana_Arr5678
armoracia_rusticana_Arr672 armoracia_rusticana armoracia_rusticana_Arr672
armoracia_rusticana_Arr6964 armoracia_rusticana armoracia_rusticana_Arr6964
armoracia_rusticana_Arr8153 armoracia_rusticana armoracia_rusticana_Arr8153
armoracia_rusticana_Arr9028 armoracia_rusticana armoracia_rusticana_Arr9028
armoracia_rusticana_Arr9029 armoracia_rusticana armoracia_rusticana_Arr9029
armoracia_rusticana_Arr9786 armoracia_rusticana armoracia_rusticana_Arr9786