PlantSME Plant secondary metabolism enzyme database
4CL

4CL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family 4CL.

Lineage Coverage
Detected in 774 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 25907 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 25910 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 25914 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
BAampscaffold_130062680 barbula_amplexifolia BAampscaffold_130062680
BAampscaffold_130071000 barbula_amplexifolia BAampscaffold_130071000
BAampscaffold_20094820 barbula_amplexifolia BAampscaffold_20094820
BAampscaffold_20095690 barbula_amplexifolia BAampscaffold_20095690
BAampscaffold_20101230 barbula_amplexifolia BAampscaffold_20101230
BAampscaffold_30123630 barbula_amplexifolia BAampscaffold_30123630
BAampscaffold_30133890 barbula_amplexifolia BAampscaffold_30133890
BAampscaffold_40138600 barbula_amplexifolia BAampscaffold_40138600
BAampscaffold_40141690 barbula_amplexifolia BAampscaffold_40141690
BAampscaffold_40148890 barbula_amplexifolia BAampscaffold_40148890
BAampscaffold_50155680 barbula_amplexifolia BAampscaffold_50155680
BAampscaffold_50160000 barbula_amplexifolia BAampscaffold_50160000
BAampscaffold_60192530 barbula_amplexifolia BAampscaffold_60192530
BAampscaffold_60200070 barbula_amplexifolia BAampscaffold_60200070
BAampscaffold_60200540 barbula_amplexifolia BAampscaffold_60200540
BAampscaffold_70203430 barbula_amplexifolia BAampscaffold_70203430
BAampscaffold_80226300 barbula_amplexifolia BAampscaffold_80226300
BAampscaffold_90235870 barbula_amplexifolia BAampscaffold_90235870
BAampscaffold_90238060 barbula_amplexifolia BAampscaffold_90238060
BAampscaffold_90239060 barbula_amplexifolia BAampscaffold_90239060
BAampscaffold_90241240 barbula_amplexifolia BAampscaffold_90241240
Bith10006480 bartramia_ithyphylla Bith10006480
Bith1480036930 bartramia_ithyphylla Bith1480036930
Bith1660058200 bartramia_ithyphylla Bith1660058200
Bith1680064600 bartramia_ithyphylla Bith1680064600
Bith1760071410 bartramia_ithyphylla Bith1760071410
Bith1820082890 bartramia_ithyphylla Bith1820082890
Bith1880087040 bartramia_ithyphylla Bith1880087040
Bith1880087960 bartramia_ithyphylla Bith1880087960
Bith1930089960 bartramia_ithyphylla Bith1930089960