PlantSME

Lineage Coverage

Detected in 784 of 789 public species; click a lineage to inspect its species list.

Algae

Bryophytes

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Rosmarinic acid pathway 5870 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009

Phenylalanine donor branch

PAL 7015 C4H 48992 4CL 25914

Tyrosine acceptor branch

TAT 14219 HPPR 5065

Condensation and hydroxylation

RAS 13433 CPR 5870

Family Gene List

Gene	Species	Protein ID
jgi\|Chlsc1\|15346\|g10124.t1	chlamydomonas_schloesseri	jgi\|Chlsc1\|15346\|g10124.t1
jgi\|Chlsc1\|3972\|g4065.t1	chlamydomonas_schloesseri	jgi\|Chlsc1\|3972\|g4065.t1
jgi\|Chlsc1\|4368\|g3080.t1	chlamydomonas_schloesseri	jgi\|Chlsc1\|4368\|g3080.t1
jgi\|Chlsc1\|6679\|g864.t1	chlamydomonas_schloesseri	jgi\|Chlsc1\|6679\|g864.t1
jgi\|Chlsc1\|741\|g7944.t1	chlamydomonas_schloesseri	jgi\|Chlsc1\|741\|g7944.t1
Cses01G0021850.1	chloranthus_sessilifolius	Cses01G0021850.1
Cses02G0015440.1	chloranthus_sessilifolius	Cses02G0015440.1
Cses03G0012850.1	chloranthus_sessilifolius	Cses03G0012850.1
Cses05G0005810.1	chloranthus_sessilifolius	Cses05G0005810.1
Cses06G0019870.1	chloranthus_sessilifolius	Cses06G0019870.1
Cses06G0027320.1	chloranthus_sessilifolius	Cses06G0027320.1
Cses06G0027340.1	chloranthus_sessilifolius	Cses06G0027340.1
Cses08G0002660.1	chloranthus_sessilifolius	Cses08G0002660.1
Cses09G0008350.1	chloranthus_sessilifolius	Cses09G0008350.1
Cses10G0013350.1	chloranthus_sessilifolius	Cses10G0013350.1
Cses10G0013490.1	chloranthus_sessilifolius	Cses10G0013490.1
Cses11G0002720.1	chloranthus_sessilifolius	Cses11G0002720.1
Cses13G0014450.1	chloranthus_sessilifolius	Cses13G0014450.1
Catmscaffold115_pilon0009570	chlorokybus_atmophyticus	Catmscaffold115_pilon0009570
Catmscaffold26_pilon0037140	chlorokybus_atmophyticus	Catmscaffold26_pilon0037140
Catmscaffold31_pilon0048240	chlorokybus_atmophyticus	Catmscaffold31_pilon0048240
Catmscaffold3_pilon0057860	chlorokybus_atmophyticus	Catmscaffold3_pilon0057860
Catmscaffold4_pilon0066610	chlorokybus_atmophyticus	Catmscaffold4_pilon0066610
Cacid2350150095760	chorisodontium_acidophyllum	Cacid2350150095760
Cacid2379630102210	chorisodontium_acidophyllum	Cacid2379630102210
Cacid2386580108000	chorisodontium_acidophyllum	Cacid2386580108000
Cacid2401550119960	chorisodontium_acidophyllum	Cacid2401550119960
Cacid2412500126930	chorisodontium_acidophyllum	Cacid2412500126930
Cacid2461470179950	chorisodontium_acidophyllum	Cacid2461470179950
Cacid2468340184160	chorisodontium_acidophyllum	Cacid2468340184160