PlantSME

Lineage Coverage

Detected in 745 of 789 public species; click a lineage to inspect its species list.

Algae

Bryophytes

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Steroid pathway 1234 current-family members Du et al. 2022; Zebosi et al. 2024

Sterol precursor formation

SQS/FDFT1 4389 SQE 4569 CAS 35857

Phytosterol backbone

SMT1/SMT2/SMT3 27781 SMO1/SMO2 4067 CPI1 1261 CYP51G1 190 FK 1234 HYD1 1364 DWF7 1524 DWF5 888 DWF1 1689

Brassinosteroid branch

DET2 1316 DWF4/CYP90B1 290 CPD/CYP90A1 103 ROT3/CYP90C1 193 CYP90D1 142 BR6OX1/CYP85A1 40 BR6OX2/CYP85A2 68

Family Gene List

Gene	Species	Protein ID
Cichscaffold_290143290.1	citrus_ichangensis	Cichscaffold_290143290.1
Cichscaffold_290143290.2	citrus_ichangensis	Cichscaffold_290143290.2
Cichscaffold_290143290.3	citrus_ichangensis	Cichscaffold_290143290.3
Cichscaffold_290143290.4	citrus_ichangensis	Cichscaffold_290143290.4
citrus_limon_GWHPCBFQ039992.1	citrus_limon	citrus_limon_GWHPCBFQ039992.1
citrus_limon_GWHPCBFQ042880.1	citrus_limon	citrus_limon_GWHPCBFQ042880.1
Cmedscaffold_180079890.1	citrus_medica	Cmedscaffold_180079890.1
Cmedscaffold_180079890.2	citrus_medica	Cmedscaffold_180079890.2
Cmedscaffold_20970098910.1	citrus_medica	Cmedscaffold_20970098910.1
Cmedscaffold_36370178500.1	citrus_medica	Cmedscaffold_36370178500.1
Cretscaffold85909_cov900155070.1	citrus_reticulata	Cretscaffold85909_cov900155070.1
Cretscaffold85909_cov900155070.2	citrus_reticulata	Cretscaffold85909_cov900155070.2
Cretscaffold85909_cov900155070.3	citrus_reticulata	Cretscaffold85909_cov900155070.3
Cretscaffold85909_cov900155070.4	citrus_reticulata	Cretscaffold85909_cov900155070.4
Csinscaffold000560113650.1	citrus_sinensis	Csinscaffold000560113650.1
CLchi10G0001570.1	cladopus_chinensis	CLchi10G0001570.1
CsonA3G0014120.1	cleistogenes_songorica	CsonA3G0014120.1
CsonB3G0014690.1	cleistogenes_songorica	CsonB3G0014690.1
Carb981540250090.1	clethra_arborea	Carb981540250090.1
CLame659120068330	climacium_americanum	CLame659120068330
Cnucscaffold24160113930	cocos_nucifera	Cnucscaffold24160113930
codonopsis_lanceolata_Cl_chr04_06700T	codonopsis_lanceolata	codonopsis_lanceolata_Cl_chr04_06700T
Ccane06G0005210.1	coffea_canephora	Ccane06G0005210.1
Ccane06G0005220.1	coffea_canephora	Ccane06G0005220.1
coix_lacryma-jobi_GWHPAAYR035084	coix_lacryma_jobi	coix_lacryma-jobi_GWHPAAYR035084
coix_lacryma-jobi_GWHPAAYR035085	coix_lacryma_jobi	coix_lacryma-jobi_GWHPAAYR035085
colocasia_esculenta_EVM0015552.1	colocasia_esculenta	colocasia_esculenta_EVM0015552.1
Cconscaffold_70162090	conocephalum_conicum	Cconscaffold_70162090
Ccapcontig069720036110.1	corchorus_capsularis	Ccapcontig069720036110.1
Ccapcontig100760113190.1	corchorus_capsularis	Ccapcontig100760113190.1