GGPPS

Atlas summary family GGPPS.

Lineage Coverage

Detected in 81 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Terpenoid pathway 100 current-family members Bergman et al. 2024; Karunanithi & Zerbe 2019; Zhang et al. 2023; Lu et al. 2023; Moghe et al. 2023

MVA precursor branch

AACT 337 HMGS 2158 HMGR 3794 MVK 1409 PMK 1501 MVD 1588

MEP precursor branch

DXS 4421 DXR 1551 MCT/IspD 1192 CMK/IspE 1150 MDS/IspF 1197 HDS/IspG 1612 HDR/IspH 1720

IPP/DMAPP and prenyl diphosphate extension

IDI 1579 GPPS 135 FPPS 5839 GGPPS 100

Skeleton formation and tailoring

TPS 36208 CYP71 13248 CYP76 46690 UGT 123661 BAHD 149019

Family Gene List

Gene	Species	Protein ID
RUchi01G0006120.1	rubus_chingii	RUchi01G0006120.1
RUchi01G0023990.1	rubus_chingii	RUchi01G0023990.1
RUchi02G0024210.1	rubus_chingii	RUchi02G0024210.1
RUchi03G0009240.1	rubus_chingii	RUchi03G0009240.1
RUchi03G0009310.1	rubus_chingii	RUchi03G0009310.1
RUchi03G0017570.1	rubus_chingii	RUchi03G0017570.1
rubus_idaeus_g11348.t1	rubus_idaeus	rubus_idaeus_g11348.t1
rubus_idaeus_g12204.t1	rubus_idaeus	rubus_idaeus_g12204.t1
rubus_idaeus_g1252.t1	rubus_idaeus	rubus_idaeus_g1252.t1
rubus_idaeus_g3347.t1	rubus_idaeus	rubus_idaeus_g3347.t1
rubus_idaeus_g7987.t1	rubus_idaeus	rubus_idaeus_g7987.t1
Rocc01G0012000.1	rubus_occidentalis	Rocc01G0012000.1
Rocc01G0025820.1	rubus_occidentalis	Rocc01G0025820.1
Rocc02G0024450.1	rubus_occidentalis	Rocc02G0024450.1
Rocc03G0033930.1	rubus_occidentalis	Rocc03G0033930.1
Rocc03G0041120.1	rubus_occidentalis	Rocc03G0041120.1
Rocc03G0041170.1	rubus_occidentalis	Rocc03G0041170.1
Sspon.02G0034600-1B-mRNA-1	saccharum_spontaneum	Sspon.02G0034600-1B-mRNA-1
Sspon.02G0034600-2C-mRNA-1:cds	saccharum_spontaneum	Sspon.02G0034600-2C-mRNA-1:cds
Sspon.06G0009670-2D-mRNA-1:cds	saccharum_spontaneum	Sspon.06G0009670-2D-mRNA-1:cds
Sspon.06G0009680-1A-mRNA-1:cds	saccharum_spontaneum	Sspon.06G0009680-1A-mRNA-1:cds
Sspon.07G0001290-1A-mRNA-1:cds	saccharum_spontaneum	Sspon.07G0001290-1A-mRNA-1:cds
Sspon.07G0001290-2B-mRNA-1:cds	saccharum_spontaneum	Sspon.07G0001290-2B-mRNA-1:cds
Sspon.07G0030070-1C-mRNA-1:cds	saccharum_spontaneum	Sspon.07G0030070-1C-mRNA-1:cds
Sspon.08G0003680-2B-mRNA-1:cds	saccharum_spontaneum	Sspon.08G0003680-2B-mRNA-1:cds
Sspp02G0025770.1	saccharum_spp_r570	Sspp02G0025770.1
Sspp03G0007520.1	saccharum_spp_r570	Sspp03G0007520.1
Sspp04G0021150.1	saccharum_spp_r570	Sspp04G0021150.1
Sspp07G0005880.1	saccharum_spp_r570	Sspp07G0005880.1
Sspp09G0019550.1	saccharum_spp_r570	Sspp09G0019550.1