HCT

Atlas summary family HCT.

Lineage Coverage

Detected in 755 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Phenylpropanoid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Phenylpropanoid pathway 14877 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013

Entry backbone

PAL 7015 C4H/CYP73A 432 4CL 25910

Hydroxycinnamoyl and monolignol backbone

HCT 14877 C3'H/CYP98A 10198 CSE 29610 CCoAOMT 6839 CCR 4440

S/G branch and monolignol formation

F5H/CYP84A 306 COMT 22394 CAD 17134

Oxidative polymerization

LAC 28156 POD 122923

Family Gene List

Gene	Species	Protein ID
Agluscaffold1938_cov1020111470	alnus_glutinosa	Agluscaffold1938_cov1020111470
Agluscaffold219777_cov960133290	alnus_glutinosa	Agluscaffold219777_cov960133290
Agluscaffold21998_cov990133760	alnus_glutinosa	Agluscaffold21998_cov990133760
Agluscaffold21998_cov990133820	alnus_glutinosa	Agluscaffold21998_cov990133820
Agluscaffold21998_cov990133830	alnus_glutinosa	Agluscaffold21998_cov990133830
Agluscaffold2213_cov1080134420	alnus_glutinosa	Agluscaffold2213_cov1080134420
Agluscaffold2373_cov1080146630	alnus_glutinosa	Agluscaffold2373_cov1080146630
Agluscaffold244_cov940150090	alnus_glutinosa	Agluscaffold244_cov940150090
Agluscaffold2906_cov980176450	alnus_glutinosa	Agluscaffold2906_cov980176450
Agluscaffold3007_cov680181120	alnus_glutinosa	Agluscaffold3007_cov680181120
Agluscaffold3007_cov680181130	alnus_glutinosa	Agluscaffold3007_cov680181130
Agluscaffold3007_cov680181160	alnus_glutinosa	Agluscaffold3007_cov680181160
Agluscaffold3007_cov680181170	alnus_glutinosa	Agluscaffold3007_cov680181170
Agluscaffold3007_cov680181180	alnus_glutinosa	Agluscaffold3007_cov680181180
Agluscaffold30643_cov1010184640	alnus_glutinosa	Agluscaffold30643_cov1010184640
Agluscaffold3140_cov910188200	alnus_glutinosa	Agluscaffold3140_cov910188200
Agluscaffold31849_cov990191420	alnus_glutinosa	Agluscaffold31849_cov990191420
Agluscaffold31849_cov990191430	alnus_glutinosa	Agluscaffold31849_cov990191430
Agluscaffold31849_cov990191440	alnus_glutinosa	Agluscaffold31849_cov990191440
Agluscaffold31849_cov990191470	alnus_glutinosa	Agluscaffold31849_cov990191470
Agluscaffold31849_cov990191480	alnus_glutinosa	Agluscaffold31849_cov990191480
Agluscaffold31849_cov990191490	alnus_glutinosa	Agluscaffold31849_cov990191490
Agluscaffold31849_cov990191500	alnus_glutinosa	Agluscaffold31849_cov990191500
Agluscaffold332909_cov1010200050	alnus_glutinosa	Agluscaffold332909_cov1010200050
Agluscaffold34172_cov970204410	alnus_glutinosa	Agluscaffold34172_cov970204410
Agluscaffold34509_cov670205950	alnus_glutinosa	Agluscaffold34509_cov670205950
Agluscaffold3538_cov990211990	alnus_glutinosa	Agluscaffold3538_cov990211990
Agluscaffold36835_cov880218250	alnus_glutinosa	Agluscaffold36835_cov880218250
Agluscaffold36835_cov880218280	alnus_glutinosa	Agluscaffold36835_cov880218280
Agluscaffold37560_cov630221230	alnus_glutinosa	Agluscaffold37560_cov630221230