HCT

Atlas summary family HCT.

Lineage Coverage

Detected in 755 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Phenylpropanoid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Phenylpropanoid pathway 14877 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013

Entry backbone

PAL 7015 C4H/CYP73A 432 4CL 25910

Hydroxycinnamoyl and monolignol backbone

HCT 14877 C3'H/CYP98A 10198 CSE 29610 CCoAOMT 6839 CCR 4440

S/G branch and monolignol formation

F5H/CYP84A 306 COMT 22394 CAD 17134

Oxidative polymerization

LAC 28156 POD 122923

Family Gene List

Gene	Species	Protein ID
Agluscaffold38270_cov860223320	alnus_glutinosa	Agluscaffold38270_cov860223320
Agluscaffold4069_cov830233740	alnus_glutinosa	Agluscaffold4069_cov830233740
Agluscaffold40747_cov940233850	alnus_glutinosa	Agluscaffold40747_cov940233850
Agluscaffold40747_cov940233870	alnus_glutinosa	Agluscaffold40747_cov940233870
Agluscaffold41520_cov1040239390	alnus_glutinosa	Agluscaffold41520_cov1040239390
Agluscaffold41520_cov1040239400	alnus_glutinosa	Agluscaffold41520_cov1040239400
Agluscaffold424345_cov900243570	alnus_glutinosa	Agluscaffold424345_cov900243570
Agluscaffold424544_cov980251250	alnus_glutinosa	Agluscaffold424544_cov980251250
Agluscaffold425975_cov850276800	alnus_glutinosa	Agluscaffold425975_cov850276800
Agluscaffold427074_cov990278280	alnus_glutinosa	Agluscaffold427074_cov990278280
Agluscaffold43462_cov1010284220	alnus_glutinosa	Agluscaffold43462_cov1010284220
Agluscaffold4522_cov880289740	alnus_glutinosa	Agluscaffold4522_cov880289740
Agluscaffold50020_cov1080310820	alnus_glutinosa	Agluscaffold50020_cov1080310820
Agluscaffold50020_cov1080310830	alnus_glutinosa	Agluscaffold50020_cov1080310830
Agluscaffold51846_cov1040316940	alnus_glutinosa	Agluscaffold51846_cov1040316940
Agluscaffold5483_cov1000326540	alnus_glutinosa	Agluscaffold5483_cov1000326540
Agluscaffold55525_cov1050328640	alnus_glutinosa	Agluscaffold55525_cov1050328640
Agluscaffold56203_cov1070331660	alnus_glutinosa	Agluscaffold56203_cov1070331660
Agluscaffold57405_cov1150335570	alnus_glutinosa	Agluscaffold57405_cov1150335570
Agluscaffold59050_cov800341350	alnus_glutinosa	Agluscaffold59050_cov800341350
Agluscaffold685_cov930368720	alnus_glutinosa	Agluscaffold685_cov930368720
Agluscaffold7300_cov1030378130	alnus_glutinosa	Agluscaffold7300_cov1030378130
Agluscaffold7300_cov1030378200	alnus_glutinosa	Agluscaffold7300_cov1030378200
Agluscaffold73683_cov1060380170	alnus_glutinosa	Agluscaffold73683_cov1060380170
Agluscaffold76399_cov1080386210	alnus_glutinosa	Agluscaffold76399_cov1080386210
Agluscaffold8089_cov1040396120	alnus_glutinosa	Agluscaffold8089_cov1040396120
Agluscaffold827_cov930400880	alnus_glutinosa	Agluscaffold827_cov930400880
Agluscaffold849_cov1080405440	alnus_glutinosa	Agluscaffold849_cov1080405440
Agluscaffold86794_cov1060408830	alnus_glutinosa	Agluscaffold86794_cov1060408830
Agluscaffold8691_cov1070409370	alnus_glutinosa	Agluscaffold8691_cov1070409370