HCT

Atlas summary family HCT.

Lineage Coverage

Detected in 755 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Phenylpropanoid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Phenylpropanoid pathway 14877 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013

Entry backbone

PAL 7015 C4H/CYP73A 432 4CL 25910

Hydroxycinnamoyl and monolignol backbone

HCT 14877 C3'H/CYP98A 10198 CSE 29610 CCoAOMT 6839 CCR 4440

S/G branch and monolignol formation

F5H/CYP84A 306 COMT 22394 CAD 17134

Oxidative polymerization

LAC 28156 POD 122923

Family Gene List

Gene	Species	Protein ID
Agluscaffold86938_cov910409420	alnus_glutinosa	Agluscaffold86938_cov910409420
Agluscaffold9680_cov720426720	alnus_glutinosa	Agluscaffold9680_cov720426720
Agluscaffold9680_cov720426740	alnus_glutinosa	Agluscaffold9680_cov720426740
alnus_rubra_ALNRU00000269-RA	alnus_rubra	alnus_rubra_ALNRU00000269-RA
alnus_rubra_ALNRU00000484-RA	alnus_rubra	alnus_rubra_ALNRU00000484-RA
alnus_rubra_ALNRU00000533-RA	alnus_rubra	alnus_rubra_ALNRU00000533-RA
alnus_rubra_ALNRU00002428-RA	alnus_rubra	alnus_rubra_ALNRU00002428-RA
alnus_rubra_ALNRU00002432-RA	alnus_rubra	alnus_rubra_ALNRU00002432-RA
alnus_rubra_ALNRU00002444-RA	alnus_rubra	alnus_rubra_ALNRU00002444-RA
alnus_rubra_ALNRU00002448-RA	alnus_rubra	alnus_rubra_ALNRU00002448-RA
alnus_rubra_ALNRU00005577-RA	alnus_rubra	alnus_rubra_ALNRU00005577-RA
alnus_rubra_ALNRU00006184-RA	alnus_rubra	alnus_rubra_ALNRU00006184-RA
alnus_rubra_ALNRU00006185-RA	alnus_rubra	alnus_rubra_ALNRU00006185-RA
alnus_rubra_ALNRU00011373-RA	alnus_rubra	alnus_rubra_ALNRU00011373-RA
alnus_rubra_ALNRU00011380-RA	alnus_rubra	alnus_rubra_ALNRU00011380-RA
alnus_rubra_ALNRU00011381-RA	alnus_rubra	alnus_rubra_ALNRU00011381-RA
alnus_rubra_ALNRU00015855-RA	alnus_rubra	alnus_rubra_ALNRU00015855-RA
alnus_rubra_ALNRU00019709-RA	alnus_rubra	alnus_rubra_ALNRU00019709-RA
alnus_rubra_ALNRU00019984-RA	alnus_rubra	alnus_rubra_ALNRU00019984-RA
alnus_rubra_ALNRU00019990-RA	alnus_rubra	alnus_rubra_ALNRU00019990-RA
alnus_rubra_ALNRU00019991-RA	alnus_rubra	alnus_rubra_ALNRU00019991-RA
alnus_rubra_ALNRU00019994-RA	alnus_rubra	alnus_rubra_ALNRU00019994-RA
alnus_rubra_ALNRU00019999-RA	alnus_rubra	alnus_rubra_ALNRU00019999-RA
alnus_rubra_ALNRU00020004-RA	alnus_rubra	alnus_rubra_ALNRU00020004-RA
alnus_rubra_ALNRU00020008-RA	alnus_rubra	alnus_rubra_ALNRU00020008-RA
alnus_rubra_ALNRU00020016-RA	alnus_rubra	alnus_rubra_ALNRU00020016-RA
alnus_rubra_ALNRU00020023-RA	alnus_rubra	alnus_rubra_ALNRU00020023-RA
alnus_rubra_ALNRU00020032-RA	alnus_rubra	alnus_rubra_ALNRU00020032-RA
alnus_rubra_ALNRU00020039-RA	alnus_rubra	alnus_rubra_ALNRU00020039-RA
alnus_rubra_ALNRU00030270-RA	alnus_rubra	alnus_rubra_ALNRU00030270-RA