PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Aaltescaffold_50372510 archidium_alternifolium Aaltescaffold_50372510
arctium_lappa_Alap.ptg000014l.g737.t1 arctium_lappa arctium_lappa_Alap.ptg000014l.g737.t1
arctium_lappa_Alap.ptg000021l.g1674.t1 arctium_lappa arctium_lappa_Alap.ptg000021l.g1674.t1
arctium_lappa_Alap.ptg000022l.g726.t1 arctium_lappa arctium_lappa_Alap.ptg000022l.g726.t1
Acat08G0004110 areca_catechu Acat08G0004110
Acat09G0018770 areca_catechu Acat09G0018770
Acat11G0021730 areca_catechu Acat11G0021730
Acat15G0018490 areca_catechu Acat15G0018490
argentina_anserina_Poanv1_12G01594.1 argentina_anserina argentina_anserina_Poanv1_12G01594.1
argentina_anserina_Poanv1_1G01111.1 argentina_anserina argentina_anserina_Poanv1_1G01111.1
argentina_anserina_Poanv1_2G01364.1 argentina_anserina argentina_anserina_Poanv1_2G01364.1
argentina_anserina_Poanv1_4G02141.1 argentina_anserina argentina_anserina_Poanv1_4G02141.1
argentina_anserina_Poanv1_9G01767.1 argentina_anserina argentina_anserina_Poanv1_9G01767.1
argentina_anserina_Poanv1_9G02742.1 argentina_anserina argentina_anserina_Poanv1_9G02742.1
EVM0014428.mRNA1 aristolochia_contorta EVM0014428.mRNA1
armoracia_rusticana_Arr27927 armoracia_rusticana armoracia_rusticana_Arr27927
armoracia_rusticana_Arr29976 armoracia_rusticana armoracia_rusticana_Arr29976
armoracia_rusticana_Arr36609 armoracia_rusticana armoracia_rusticana_Arr36609
armoracia_rusticana_Arr3784 armoracia_rusticana armoracia_rusticana_Arr3784
armoracia_rusticana_Arr40393 armoracia_rusticana armoracia_rusticana_Arr40393
artemisia_argyi_GWHPBRAE005317 artemisia_argyi artemisia_argyi_GWHPBRAE005317
artemisia_argyi_GWHPBRAE022001 artemisia_argyi artemisia_argyi_GWHPBRAE022001
artemisia_argyi_GWHPBRAE035952 artemisia_argyi artemisia_argyi_GWHPBRAE035952
artemisia_argyi_GWHPBRAE036093 artemisia_argyi artemisia_argyi_GWHPBRAE036093
artemisia_argyi_GWHPBRAE036133 artemisia_argyi artemisia_argyi_GWHPBRAE036133
artemisia_argyi_GWHPBRAE052753 artemisia_argyi artemisia_argyi_GWHPBRAE052753
artemisia_tridentata_ANN12312-RA artemisia_tridentata artemisia_tridentata_ANN12312-RA
artemisia_tridentata_ANN16338-RA artemisia_tridentata artemisia_tridentata_ANN16338-RA
artemisia_tridentata_ANN17609-RA artemisia_tridentata artemisia_tridentata_ANN17609-RA
artemisia_tridentata_ANN41161-RA artemisia_tridentata artemisia_tridentata_ANN41161-RA