PlantSME Plant secondary metabolism enzyme database
ISY

ISY

Atlas summary family ISY.

Lineage Coverage
Detected in 744 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Prunus domestica
Citrus limon
Pinus taeda
Populus glandulosa x p.alba
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 4217 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
fragaria_chiloensis_augustus_masked-2C-processed-gene-276.44-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-2C-processed-gene-276.44-mRNA-1
fragaria_chiloensis_augustus_masked-3A-processed-gene-49.117-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3A-processed-gene-49.117-mRNA-1
fragaria_chiloensis_augustus_masked-3D-processed-gene-40.91-mRNA-1 fragaria_chiloensis fragaria_chiloensis_augustus_masked-3D-processed-gene-40.91-mRNA-1
fragaria_chiloensis_maker-2A-augustus-gene-274.43-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-2A-augustus-gene-274.43-mRNA-1
fragaria_chiloensis_maker-3B-exonerate_protein2genome-gene-266.82-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3B-exonerate_protein2genome-gene-266.82-mRNA-1
fragaria_chiloensis_maker-3C-exonerate_protein2genome-gene-291.54-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-3C-exonerate_protein2genome-gene-291.54-mRNA-1
fragaria_chiloensis_maker-4A-augustus-gene-245.113-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-4A-augustus-gene-245.113-mRNA-1
fragaria_chiloensis_maker-4B-augustus-gene-233.116-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-4B-augustus-gene-233.116-mRNA-1
fragaria_chiloensis_maker-4D-augustus-gene-51.5-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-4D-augustus-gene-51.5-mRNA-1
fragaria_chiloensis_maker-5A-exonerate_protein2genome-gene-145.51-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-5A-exonerate_protein2genome-gene-145.51-mRNA-1
fragaria_chiloensis_maker-5C-exonerate_protein2genome-gene-166.16-mRNA-1 fragaria_chiloensis fragaria_chiloensis_maker-5C-exonerate_protein2genome-gene-166.16-mRNA-1
fragaria_iinumae_evm.model.scaf_14.984 fragaria_iinumae fragaria_iinumae_evm.model.scaf_14.984
fragaria_iinumae_evm.model.scaf_51.326 fragaria_iinumae fragaria_iinumae_evm.model.scaf_51.326
fragaria_iinumae_evm.model.scaf_51.330 fragaria_iinumae fragaria_iinumae_evm.model.scaf_51.330
fragaria_iinumae_evm.model.scaf_51.422 fragaria_iinumae fragaria_iinumae_evm.model.scaf_51.422
fragaria_iinumae_evm.model.scaf_73.398 fragaria_iinumae fragaria_iinumae_evm.model.scaf_73.398
fragaria_iinumae_evm.model.scaf_94.470 fragaria_iinumae fragaria_iinumae_evm.model.scaf_94.470
fragaria_mandshurica_evm.model.chr0.841 fragaria_mandshurica fragaria_mandshurica_evm.model.chr0.841
fragaria_mandshurica_evm.model.chr2.133 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.133
fragaria_mandshurica_evm.model.chr2.134 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.134
fragaria_mandshurica_evm.model.chr2.216 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.216
fragaria_mandshurica_evm.model.chr2.224 fragaria_mandshurica fragaria_mandshurica_evm.model.chr2.224
fragaria_mandshurica_evm.model.chr3.2682 fragaria_mandshurica fragaria_mandshurica_evm.model.chr3.2682
fragaria_mandshurica_evm.model.chr3.3330 fragaria_mandshurica fragaria_mandshurica_evm.model.chr3.3330
fragaria_mandshurica_evm.model.chr4.549 fragaria_mandshurica fragaria_mandshurica_evm.model.chr4.549
fragaria_mandshurica_evm.model.chr4.684 fragaria_mandshurica fragaria_mandshurica_evm.model.chr4.684
fragaria_mandshurica_evm.model.chr5.3102 fragaria_mandshurica fragaria_mandshurica_evm.model.chr5.3102
FnilGWHABKC000000020092550.1 fragaria_nilgerrensis FnilGWHABKC000000020092550.1
FnilGWHABKC000000030105570.1 fragaria_nilgerrensis FnilGWHABKC000000030105570.1
FnilGWHABKC000000040142470.1 fragaria_nilgerrensis FnilGWHABKC000000040142470.1