PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Fsul2722760042760 fontinalis_sullivantii Fsul2722760042760
Fsul2788190104900 fontinalis_sullivantii Fsul2788190104900
Fsul2791470109940 fontinalis_sullivantii Fsul2791470109940
Fsul2809050151170 fontinalis_sullivantii Fsul2809050151170
Fsul2820500183260 fontinalis_sullivantii Fsul2820500183260
Fsul2820790184560 fontinalis_sullivantii Fsul2820790184560
Fsul2836110236120 fontinalis_sullivantii Fsul2836110236120
fortunella_hindsii_sjg034670.1 fortunella_hindsii fortunella_hindsii_sjg034670.1
fortunella_hindsii_sjg141140.1 fortunella_hindsii fortunella_hindsii_sjg141140.1
fortunella_hindsii_sjg146720.1 fortunella_hindsii fortunella_hindsii_sjg146720.1
fortunella_hindsii_sjg170590.1 fortunella_hindsii fortunella_hindsii_sjg170590.1
fortunella_hindsii_sjg171720.1 fortunella_hindsii fortunella_hindsii_sjg171720.1
fortunella_hindsii_sjg181130.1 fortunella_hindsii fortunella_hindsii_sjg181130.1
fortunella_hindsii_sjg252410.1 fortunella_hindsii fortunella_hindsii_sjg252410.1
fortunella_hindsii_sjg282260.1 fortunella_hindsii fortunella_hindsii_sjg282260.1
Fossombronia11760045300 fossombronia Fossombronia11760045300
Fossombronia2040128330 fossombronia Fossombronia2040128330
Fossombronia2040128370 fossombronia Fossombronia2040128370
Fossombronia7070273880 fossombronia Fossombronia7070273880
Fossombronia7710299860 fossombronia Fossombronia7710299860
Fossombronia8330334800 fossombronia Fossombronia8330334800
Fossombronia852160358530 fossombronia Fossombronia852160358530
Fossombronia854640361310 fossombronia Fossombronia854640361310
Fossombronia9560398570 fossombronia Fossombronia9560398570
Fossombronia9560398580 fossombronia Fossombronia9560398580
Fossombronia9560398600 fossombronia Fossombronia9560398600
Fossombronia9560398620 fossombronia Fossombronia9560398620
Fossombronia9560398660 fossombronia Fossombronia9560398660
Fossombronia9740403160 fossombronia Fossombronia9740403160
FanaFAN_r2.3ch00070160 fragaria_ananassa FanaFAN_r2.3ch00070160