PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Haplomitrium11014040146040 haplomitrium Haplomitrium11014040146040
Haplomitrium11015040146820 haplomitrium Haplomitrium11015040146820
Haplomitrium11028360154290 haplomitrium Haplomitrium11028360154290
Haplomitrium11072290174650 haplomitrium Haplomitrium11072290174650
Haplomitrium24740208800 haplomitrium Haplomitrium24740208800
Haplomitrium24740208810 haplomitrium Haplomitrium24740208810
Haplomitrium6380222290 haplomitrium Haplomitrium6380222290
Haplomitrium6924260225600 haplomitrium Haplomitrium6924260225600
Haplomitrium7074840227020 haplomitrium Haplomitrium7074840227020
Haplomitrium9786770260820 haplomitrium Haplomitrium9786770260820
Hcilscaffold_20065480 hedwigia_ciliata Hcilscaffold_20065480
Hcilscaffold_30075760 hedwigia_ciliata Hcilscaffold_30075760
Hcilscaffold_50130730 hedwigia_ciliata Hcilscaffold_50130730
Hcilscaffold_60136700 hedwigia_ciliata Hcilscaffold_60136700
Hcilscaffold_60141130 hedwigia_ciliata Hcilscaffold_60141130
Hcilscaffold_60145920 hedwigia_ciliata Hcilscaffold_60145920
Hcilscaffold_60145930 hedwigia_ciliata Hcilscaffold_60145930
Hcilscaffold_60154130 hedwigia_ciliata Hcilscaffold_60154130
Hcilscaffold_70162460 hedwigia_ciliata Hcilscaffold_70162460
Hcilscaffold_70162480 hedwigia_ciliata Hcilscaffold_70162480
Hcilscaffold_70198670 hedwigia_ciliata Hcilscaffold_70198670
Hcilscaffold_80208640 hedwigia_ciliata Hcilscaffold_80208640
Hcilscaffold_90239270 hedwigia_ciliata Hcilscaffold_90239270
Hcilscaffold_90239280 hedwigia_ciliata Hcilscaffold_90239280
Hcilscaffold_90239330 hedwigia_ciliata Hcilscaffold_90239330
Hcilscaffold_90239380 hedwigia_ciliata Hcilscaffold_90239380
Hcilscaffold_90239390 hedwigia_ciliata Hcilscaffold_90239390
Hann02G0018850.1 helianthus_annuus Hann02G0018850.1
Hann02G0018920.1 helianthus_annuus Hann02G0018920.1
Hann02G0020070.1 helianthus_annuus Hann02G0020070.1