PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Hann05G0007260.1 helianthus_annuus Hann05G0007260.1
Hann07G0008930.1 helianthus_annuus Hann07G0008930.1
Hann08G0005810.1 helianthus_annuus Hann08G0005810.1
Hann08G0006690.1 helianthus_annuus Hann08G0006690.1
Hann09G0008200.1 helianthus_annuus Hann09G0008200.1
Hann11G0009800.1 helianthus_annuus Hann11G0009800.1
Hann13G0012340.1 helianthus_annuus Hann13G0012340.1
Hann13G0012350.1 helianthus_annuus Hann13G0012350.1
Hann13G0012360.1 helianthus_annuus Hann13G0012360.1
Hann13G0021670.1 helianthus_annuus Hann13G0021670.1
Hann14G0025150.1 helianthus_annuus Hann14G0025150.1
Hann14G0026840.1 helianthus_annuus Hann14G0026840.1
Hann14G0031700.1 helianthus_annuus Hann14G0031700.1
heliophila_variabilis_HV01G017050 heliophila_variabilis heliophila_variabilis_HV01G017050
heliophila_variabilis_HV01G017060 heliophila_variabilis heliophila_variabilis_HV01G017060
heliophila_variabilis_HV01G017120 heliophila_variabilis heliophila_variabilis_HV01G017120
heliophila_variabilis_HV01G019240 heliophila_variabilis heliophila_variabilis_HV01G019240
heliophila_variabilis_HV02G013710 heliophila_variabilis heliophila_variabilis_HV02G013710
heliophila_variabilis_HV02G039170 heliophila_variabilis heliophila_variabilis_HV02G039170
heliophila_variabilis_HV03G008260 heliophila_variabilis heliophila_variabilis_HV03G008260
heliophila_variabilis_HV06G000490 heliophila_variabilis heliophila_variabilis_HV06G000490
heliophila_variabilis_HV07G006710 heliophila_variabilis heliophila_variabilis_HV07G006710
heliophila_variabilis_HV07G026420 heliophila_variabilis heliophila_variabilis_HV07G026420
heliophila_variabilis_HV09G005210 heliophila_variabilis heliophila_variabilis_HV09G005210
heliophila_variabilis_HV09G005280 heliophila_variabilis heliophila_variabilis_HV09G005280
heliophila_variabilis_HV09G008780 heliophila_variabilis heliophila_variabilis_HV09G008780
HhamSuperscaffold110075600 hibiscus_hamabo HhamSuperscaffold110075600
HhamSuperscaffold160207270 hibiscus_hamabo HhamSuperscaffold160207270
HhamSuperscaffold170237290 hibiscus_hamabo HhamSuperscaffold170237290
HhamSuperscaffold200338100 hibiscus_hamabo HhamSuperscaffold200338100