PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Arupctg000699_np121212120040500 andreaea_rupestris Arupctg000699_np121212120040500
Arupctg000699_np121212120040530 andreaea_rupestris Arupctg000699_np121212120040530
Arupctg000750_np121212120049460 andreaea_rupestris Arupctg000750_np121212120049460
Arupctg001455_np121212120166990 andreaea_rupestris Arupctg001455_np121212120166990
Arupctg001638_np121212120196200 andreaea_rupestris Arupctg001638_np121212120196200
Arupctg001638_np121212120196210 andreaea_rupestris Arupctg001638_np121212120196210
Arupctg001638_np121212120196230 andreaea_rupestris Arupctg001638_np121212120196230
Arupctg001638_np121212120196240 andreaea_rupestris Arupctg001638_np121212120196240
Arupctg001638_np121212120196250 andreaea_rupestris Arupctg001638_np121212120196250
Arupctg001638_np121212120196270 andreaea_rupestris Arupctg001638_np121212120196270
Arupctg001638_np121212120196280 andreaea_rupestris Arupctg001638_np121212120196280
Arupctg001792_np121212120216390 andreaea_rupestris Arupctg001792_np121212120216390
Arupctg001792_np121212120216400 andreaea_rupestris Arupctg001792_np121212120216400
Awil3355110089920 andreaea_wilsonii Awil3355110089920
Awil3400091490 andreaea_wilsonii Awil3400091490
Awil3400091540 andreaea_wilsonii Awil3400091540
Awil3770105670 andreaea_wilsonii Awil3770105670
Awil4200111500 andreaea_wilsonii Awil4200111500
Awil9400153360 andreaea_wilsonii Awil9400153360
Awil9680157040 andreaea_wilsonii Awil9680157040
Amac100000030 andreaeobryum_macrosporum Amac100000030
Amac1024290001430 andreaeobryum_macrosporum Amac1024290001430
Amac1067510004520 andreaeobryum_macrosporum Amac1067510004520
Amac1427990024920 andreaeobryum_macrosporum Amac1427990024920
Amac1514540035330 andreaeobryum_macrosporum Amac1514540035330
Amac1521440036380 andreaeobryum_macrosporum Amac1521440036380
Amac1532350040820 andreaeobryum_macrosporum Amac1532350040820
Amac1576490051250 andreaeobryum_macrosporum Amac1576490051250
Amac1576490051260 andreaeobryum_macrosporum Amac1576490051260
Amac1577740052150 andreaeobryum_macrosporum Amac1577740052150