PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Cfolscaffold2670147490 cephalotus_follicularis Cfolscaffold2670147490
Cfolscaffold49120254840 cephalotus_follicularis Cfolscaffold49120254840
Cfolscaffold49120254850 cephalotus_follicularis Cfolscaffold49120254850
Cfolscaffold5900284800 cephalotus_follicularis Cfolscaffold5900284800
Cser01G0028680.1 cerasus_serrulata Cser01G0028680.1
Cser02G0023590.1 cerasus_serrulata Cser02G0023590.1
Cser03G0023930.1 cerasus_serrulata Cser03G0023930.1
Cser03G0024320.1 cerasus_serrulata Cser03G0024320.1
Cser06G0010100.1 cerasus_serrulata Cser06G0010100.1
Cser06G0025570.1 cerasus_serrulata Cser06G0025570.1
CserContig00118_ERROPOS2382800003690.1 cerasus_serrulata CserContig00118_ERROPOS2382800003690.1
CserContig00118_ERROPOS2382800003700.1 cerasus_serrulata CserContig00118_ERROPOS2382800003700.1
Cyed0A0G0124930 cerasus_yedoensis Cyed0A0G0124930
Cyed0A0G0142600 cerasus_yedoensis Cyed0A0G0142600
Cyed0A0G0162680 cerasus_yedoensis Cyed0A0G0162680
Cyed0A0G0162690 cerasus_yedoensis Cyed0A0G0162690
Cyed0A0G0162700 cerasus_yedoensis Cyed0A0G0162700
Cyed0A2G0031330 cerasus_yedoensis Cyed0A2G0031330
Cyed0A3G0029670 cerasus_yedoensis Cyed0A3G0029670
Cyed0A6G0010050 cerasus_yedoensis Cyed0A6G0010050
Cyed0A6G0036610 cerasus_yedoensis Cyed0A6G0036610
Cyed0A6G0045320 cerasus_yedoensis Cyed0A6G0045320
Cyed0E0G0116530 cerasus_yedoensis Cyed0E0G0116530
Cyed0E0G0121750 cerasus_yedoensis Cyed0E0G0121750
Cyed0E0G0121770 cerasus_yedoensis Cyed0E0G0121770
Cyed0E2G0024590 cerasus_yedoensis Cyed0E2G0024590
Cyed0E3G0029540 cerasus_yedoensis Cyed0E3G0029540
Cyed0E6G0010700 cerasus_yedoensis Cyed0E6G0010700
Ccanascaffold10|size20661020011850 cercis_canadensis Ccanascaffold10|size20661020011850
Ccanascaffold1175|size271040019870 cercis_canadensis Ccanascaffold1175|size271040019870