PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
cyperus_esculentus_CESC_13583 cyperus_esculentus cyperus_esculentus_CESC_13583
cyperus_esculentus_CESC_15121 cyperus_esculentus cyperus_esculentus_CESC_15121
cyperus_esculentus_CESC_15122 cyperus_esculentus cyperus_esculentus_CESC_15122
cyperus_esculentus_CESC_17193 cyperus_esculentus cyperus_esculentus_CESC_17193
DJ01Gene00229 daemonorops_jenkinsiana DJ01Gene00229
DJ01Gene00230 daemonorops_jenkinsiana DJ01Gene00230
DJ01Gene00865 daemonorops_jenkinsiana DJ01Gene00865
DJ01Gene03089 daemonorops_jenkinsiana DJ01Gene03089
DJ01Gene07824 daemonorops_jenkinsiana DJ01Gene07824
DJ01Gene14690 daemonorops_jenkinsiana DJ01Gene14690
DJ01Gene15399 daemonorops_jenkinsiana DJ01Gene15399
DJ01Gene19957 daemonorops_jenkinsiana DJ01Gene19957
DJ01Gene20409 daemonorops_jenkinsiana DJ01Gene20409
DJ01Gene23093 daemonorops_jenkinsiana DJ01Gene23093
DJ01Gene24264 daemonorops_jenkinsiana DJ01Gene24264
DJ01Gene24407 daemonorops_jenkinsiana DJ01Gene24407
DJ01Gene25027 daemonorops_jenkinsiana DJ01Gene25027
DJ01Gene29206 daemonorops_jenkinsiana DJ01Gene29206
DJ01Gene29207 daemonorops_jenkinsiana DJ01Gene29207
DJ01Gene29208 daemonorops_jenkinsiana DJ01Gene29208
DJ01Gene29209 daemonorops_jenkinsiana DJ01Gene29209
DJ01Gene29210 daemonorops_jenkinsiana DJ01Gene29210
DJ01Gene29213 daemonorops_jenkinsiana DJ01Gene29213
DJ01Gene42822 daemonorops_jenkinsiana DJ01Gene42822
DJ01Gene44597 daemonorops_jenkinsiana DJ01Gene44597
DJ01Gene58935 daemonorops_jenkinsiana DJ01Gene58935
DJ01Gene68609 daemonorops_jenkinsiana DJ01Gene68609
dalbergia_odorifera_evm.model.scaffold_111.47 dalbergia_odorifera dalbergia_odorifera_evm.model.scaffold_111.47
dalbergia_odorifera_evm.model.scaffold_113.121 dalbergia_odorifera dalbergia_odorifera_evm.model.scaffold_113.121
dalbergia_odorifera_evm.model.scaffold_222.1129 dalbergia_odorifera dalbergia_odorifera_evm.model.scaffold_222.1129