PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Dgloscaffold420_cov820243690 datisca_glomerata Dgloscaffold420_cov820243690
Dgloscaffold420_cov820243710 datisca_glomerata Dgloscaffold420_cov820243710
Dgloscaffold685_cov830301920 datisca_glomerata Dgloscaffold685_cov830301920
Dgloscaffold712_cov820311800 datisca_glomerata Dgloscaffold712_cov820311800
Dgloscaffold785_cov830326190 datisca_glomerata Dgloscaffold785_cov830326190
Dgloscaffold785_cov830326210 datisca_glomerata Dgloscaffold785_cov830326210
Dgloscaffold785_cov830326220 datisca_glomerata Dgloscaffold785_cov830326220
Dgloscaffold785_cov830326240 datisca_glomerata Dgloscaffold785_cov830326240
Dcar02G0031230.1 daucus_carota Dcar02G0031230.1
Dcar04G0010830.1 daucus_carota Dcar04G0010830.1
Dcar05G0016280.1 daucus_carota Dcar05G0016280.1
Dcar06G0004030.1 daucus_carota Dcar06G0004030.1
Dcar06G0024400.1 daucus_carota Dcar06G0024400.1
Dinv02G0006510.1 davidia_involucrata Dinv02G0006510.1
Dinv03G0003380.1 davidia_involucrata Dinv03G0003380.1
Dinv09G0015450.1 davidia_involucrata Dinv09G0015450.1
Dinv09G0015460.1 davidia_involucrata Dinv09G0015460.1
Dinv11G0013850.1 davidia_involucrata Dinv11G0013850.1
Dinv11G0013860.1 davidia_involucrata Dinv11G0013860.1
Dinv14G0008530.1 davidia_involucrata Dinv14G0008530.1
Dinv16G0008610.1 davidia_involucrata Dinv16G0008610.1
Dinv17G0007270.1 davidia_involucrata Dinv17G0007270.1
Dinv18G0007330.1 davidia_involucrata Dinv18G0007330.1
Dinv19G0000110.1 davidia_involucrata Dinv19G0000110.1
KAH0456005.1 dendrobium_chrysotoxum KAH0456005.1
KAH0456219.1 dendrobium_chrysotoxum KAH0456219.1
KAH0456655.1 dendrobium_chrysotoxum KAH0456655.1
KAH0457160.1 dendrobium_chrysotoxum KAH0457160.1
KAH0466382.1 dendrobium_chrysotoxum KAH0466382.1
Dhuo06G0015210 dendrobium_huoshanense Dhuo06G0015210