PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Dhuo06G0015500 dendrobium_huoshanense Dhuo06G0015500
Dhuo15G0001130 dendrobium_huoshanense Dhuo15G0001130
Dhuo15G0009720 dendrobium_huoshanense Dhuo15G0009720
KAI0499680.1 dendrobium_nobile KAI0499680.1
KAI0520649.1 dendrobium_nobile KAI0520649.1
KAI0527478.1 dendrobium_nobile KAI0527478.1
genome_Dca13664.1 dianthus_caryophyllus genome_Dca13664.1
genome_Dca13751.1 dianthus_caryophyllus genome_Dca13751.1
genome_Dca19599.1 dianthus_caryophyllus genome_Dca19599.1
genome_Dca25580.1 dianthus_caryophyllus genome_Dca25580.1
genome_Dca27646.1 dianthus_caryophyllus genome_Dca27646.1
genome_Dca2907.1 dianthus_caryophyllus genome_Dca2907.1
genome_Dca37705.1 dianthus_caryophyllus genome_Dca37705.1
genome_Dca40535.1 dianthus_caryophyllus genome_Dca40535.1
genome_Dca43605.1 dianthus_caryophyllus genome_Dca43605.1
genome_Dca44990.1 dianthus_caryophyllus genome_Dca44990.1
genome_Dca48763.1 dianthus_caryophyllus genome_Dca48763.1
genome_Dca53691.1 dianthus_caryophyllus genome_Dca53691.1
genome_Dca54310.1 dianthus_caryophyllus genome_Dca54310.1
genome_Dca56943.1 dianthus_caryophyllus genome_Dca56943.1
genome_Dca57541.1 dianthus_caryophyllus genome_Dca57541.1
genome_Dca58187.1 dianthus_caryophyllus genome_Dca58187.1
genome_Dca940.1 dianthus_caryophyllus genome_Dca940.1
Dchi1158110028170 dicranoloma_chilense Dchi1158110028170
Dchi1564920083900 dicranoloma_chilense Dchi1564920083900
Dchi1564920083910 dicranoloma_chilense Dchi1564920083910
Dchi1662260137980 dicranoloma_chilense Dchi1662260137980
Dchi1662260138010 dicranoloma_chilense Dchi1662260138010
Dchi1677780155380 dicranoloma_chilense Dchi1677780155380
Dchi1684590164560 dicranoloma_chilense Dchi1684590164560