PlantSME Plant secondary metabolism enzyme database
PYKS

PYKS

Atlas summary family PYKS.

Lineage Coverage
Detected in 758 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Rhynchospora pubera
Triticum turgidum
Triticum aestivum
Avena sativa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 11713 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Aturscaffold_70245230 aulacomnium_turgidum Aturscaffold_70245230
Aturscaffold_80266950 aulacomnium_turgidum Aturscaffold_80266950
Aturscaffold_80268850 aulacomnium_turgidum Aturscaffold_80268850
Aturscaffold_80284190 aulacomnium_turgidum Aturscaffold_80284190
Aturscaffold_80296350 aulacomnium_turgidum Aturscaffold_80296350
Aprocontig_KL6621090021060.1 auxenochlorella_protothecoides Aprocontig_KL6621090021060.1
Aprocontig_KL6621410044820.1 auxenochlorella_protothecoides Aprocontig_KL6621410044820.1
AatlScoFOjO_1310_17880006320.1 avena_atlantica AatlScoFOjO_1310_17880006320.1
AatlScoFOjO_1310_17880007630.1 avena_atlantica AatlScoFOjO_1310_17880007630.1
AatlScoFOjO_1310_17880018390.1 avena_atlantica AatlScoFOjO_1310_17880018390.1
AatlScoFOjO_1310_17880018410.1 avena_atlantica AatlScoFOjO_1310_17880018410.1
AatlScoFOjO_1310_17880026010.1 avena_atlantica AatlScoFOjO_1310_17880026010.1
AatlScoFOjO_1310_17880026510.1 avena_atlantica AatlScoFOjO_1310_17880026510.1
AatlScoFOjO_1310_17880030090.1 avena_atlantica AatlScoFOjO_1310_17880030090.1
AatlScoFOjO_1310_17880050900.1 avena_atlantica AatlScoFOjO_1310_17880050900.1
AatlScoFOjO_1426_19520060010.1 avena_atlantica AatlScoFOjO_1426_19520060010.1
AatlScoFOjO_1426_19520060030.1 avena_atlantica AatlScoFOjO_1426_19520060030.1
AatlScoFOjO_1426_19520060040.1 avena_atlantica AatlScoFOjO_1426_19520060040.1
AatlScoFOjO_1426_19520060060.1 avena_atlantica AatlScoFOjO_1426_19520060060.1
AatlScoFOjO_1426_19520060070.1 avena_atlantica AatlScoFOjO_1426_19520060070.1
AatlScoFOjO_1702_23380084810.1 avena_atlantica AatlScoFOjO_1702_23380084810.1
AatlScoFOjO_1702_23380085580.1 avena_atlantica AatlScoFOjO_1702_23380085580.1
AatlScoFOjO_1702_23380099530.1 avena_atlantica AatlScoFOjO_1702_23380099530.1
AatlScoFOjO_1702_23380108130.1 avena_atlantica AatlScoFOjO_1702_23380108130.1
AatlScoFOjO_1702_23380116280.1 avena_atlantica AatlScoFOjO_1702_23380116280.1
AatlScoFOjO_1702_23380117200.1 avena_atlantica AatlScoFOjO_1702_23380117200.1
AatlScoFOjO_1702_23380118280.1 avena_atlantica AatlScoFOjO_1702_23380118280.1
AatlScoFOjO_1702_23380118300.1 avena_atlantica AatlScoFOjO_1702_23380118300.1
AatlScoFOjO_1702_23380126050.1 avena_atlantica AatlScoFOjO_1702_23380126050.1
AatlScoFOjO_1702_23380129870.1 avena_atlantica AatlScoFOjO_1702_23380129870.1