PlantSME Plant secondary metabolism enzyme database
PYKS

PYKS

Atlas summary family PYKS.

Lineage Coverage
Detected in 758 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Rhynchospora pubera
Triticum turgidum
Triticum aestivum
Avena sativa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 11713 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
AcruScioBoG_4119_HRSCAF_41380208190.1 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380208190.1
AcruScioBoG_4119_HRSCAF_41380208190.2 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380208190.2
AcruScioBoG_4119_HRSCAF_41380213690.1 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380213690.1
AcruScioBoG_4119_HRSCAF_41380213830.1 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380213830.1
AcruScioBoG_94932_HRSCAF_951340228020.1 amaranthus_cruentus AcruScioBoG_94932_HRSCAF_951340228020.1
AMhypScaffold_100027260.1 amaranthus_hypochondriacus AMhypScaffold_100027260.1
AMhypScaffold_100027580.1 amaranthus_hypochondriacus AMhypScaffold_100027580.1
AMhypScaffold_100039370.1 amaranthus_hypochondriacus AMhypScaffold_100039370.1
AMhypScaffold_10007780.1 amaranthus_hypochondriacus AMhypScaffold_10007780.1
AMhypScaffold_10024060.1 amaranthus_hypochondriacus AMhypScaffold_10024060.1
AMhypScaffold_110043660.1 amaranthus_hypochondriacus AMhypScaffold_110043660.1
AMhypScaffold_110043900.1 amaranthus_hypochondriacus AMhypScaffold_110043900.1
AMhypScaffold_120064900.1 amaranthus_hypochondriacus AMhypScaffold_120064900.1
AMhypScaffold_140081900.1 amaranthus_hypochondriacus AMhypScaffold_140081900.1
AMhypScaffold_140081910.1 amaranthus_hypochondriacus AMhypScaffold_140081910.1
AMhypScaffold_140081920.1 amaranthus_hypochondriacus AMhypScaffold_140081920.1
AMhypScaffold_140084640.1 amaranthus_hypochondriacus AMhypScaffold_140084640.1
AMhypScaffold_150091380.1 amaranthus_hypochondriacus AMhypScaffold_150091380.1
AMhypScaffold_160102830.1 amaranthus_hypochondriacus AMhypScaffold_160102830.1
AMhypScaffold_160109010.1 amaranthus_hypochondriacus AMhypScaffold_160109010.1
AMhypScaffold_160109410.1 amaranthus_hypochondriacus AMhypScaffold_160109410.1
AMhypScaffold_20113590.1 amaranthus_hypochondriacus AMhypScaffold_20113590.1
AMhypScaffold_20115840.1 amaranthus_hypochondriacus AMhypScaffold_20115840.1
AMhypScaffold_20126090.1 amaranthus_hypochondriacus AMhypScaffold_20126090.1
AMhypScaffold_20128200.1 amaranthus_hypochondriacus AMhypScaffold_20128200.1
AMhypScaffold_30137900.1 amaranthus_hypochondriacus AMhypScaffold_30137900.1
AMhypScaffold_30139500.1 amaranthus_hypochondriacus AMhypScaffold_30139500.1
AMhypScaffold_50180560.1 amaranthus_hypochondriacus AMhypScaffold_50180560.1
AMhypScaffold_60190780.1 amaranthus_hypochondriacus AMhypScaffold_60190780.1
AMhypScaffold_80210600.1 amaranthus_hypochondriacus AMhypScaffold_80210600.1