PYKS

Atlas summary family PYKS.

Lineage Coverage

Detected in 758 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 11713 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
AMhypScaffold_80213280.1	amaranthus_hypochondriacus	AMhypScaffold_80213280.1
AMhypScaffold_90226810.1	amaranthus_hypochondriacus	AMhypScaffold_90226810.1
MAKER_02041-RA	amaranthus_palmeri	MAKER_02041-RA
MAKER_03165-RA	amaranthus_palmeri	MAKER_03165-RA
MAKER_03465-RA	amaranthus_palmeri	MAKER_03465-RA
MAKER_08034-RA	amaranthus_palmeri	MAKER_08034-RA
MAKER_12796-RA	amaranthus_palmeri	MAKER_12796-RA
MAKER_13190-RA	amaranthus_palmeri	MAKER_13190-RA
MAKER_13460-RA	amaranthus_palmeri	MAKER_13460-RA
MAKER_16649-RA	amaranthus_palmeri	MAKER_16649-RA
MAKER_16675-RA	amaranthus_palmeri	MAKER_16675-RA
MAKER_18723-RA	amaranthus_palmeri	MAKER_18723-RA
MAKER_21185-RA	amaranthus_palmeri	MAKER_21185-RA
MAKER_23051-RA	amaranthus_palmeri	MAKER_23051-RA
MAKER_23629-RA	amaranthus_palmeri	MAKER_23629-RA
MAKER_24280-RA	amaranthus_palmeri	MAKER_24280-RA
MAKER_24429-RA	amaranthus_palmeri	MAKER_24429-RA
MAKER_27066-RA	amaranthus_palmeri	MAKER_27066-RA
MAKER_27298-RA	amaranthus_palmeri	MAKER_27298-RA
MAKER_29257-RA	amaranthus_palmeri	MAKER_29257-RA
MAKER_30117-RA	amaranthus_palmeri	MAKER_30117-RA
MAKER_31564-RA	amaranthus_palmeri	MAKER_31564-RA
MAKER_34458-RA	amaranthus_palmeri	MAKER_34458-RA
mRNA24823.CDS2	amaranthus_palmeri	mRNA24823.CDS2
amaranthus_tricolor_g10277.t1	amaranthus_tricolor	amaranthus_tricolor_g10277.t1
amaranthus_tricolor_g12271.t1	amaranthus_tricolor	amaranthus_tricolor_g12271.t1
amaranthus_tricolor_g12445.t1	amaranthus_tricolor	amaranthus_tricolor_g12445.t1
amaranthus_tricolor_g13857.t1	amaranthus_tricolor	amaranthus_tricolor_g13857.t1
amaranthus_tricolor_g13889.t1	amaranthus_tricolor	amaranthus_tricolor_g13889.t1
amaranthus_tricolor_g14700.t1	amaranthus_tricolor	amaranthus_tricolor_g14700.t1