PlantSME Plant secondary metabolism enzyme database
PYKS

PYKS

Atlas summary family PYKS.

Lineage Coverage
Detected in 758 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Rhynchospora pubera
Triticum turgidum
Triticum aestivum
Avena sativa
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 11713 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
amaranthus_tricolor_g15216.t1 amaranthus_tricolor amaranthus_tricolor_g15216.t1
amaranthus_tricolor_g153.t1 amaranthus_tricolor amaranthus_tricolor_g153.t1
amaranthus_tricolor_g15468.t1 amaranthus_tricolor amaranthus_tricolor_g15468.t1
amaranthus_tricolor_g16833.t1 amaranthus_tricolor amaranthus_tricolor_g16833.t1
amaranthus_tricolor_g17419.t1 amaranthus_tricolor amaranthus_tricolor_g17419.t1
amaranthus_tricolor_g17618.t1 amaranthus_tricolor amaranthus_tricolor_g17618.t1
amaranthus_tricolor_g19129.t1 amaranthus_tricolor amaranthus_tricolor_g19129.t1
amaranthus_tricolor_g19914.t1 amaranthus_tricolor amaranthus_tricolor_g19914.t1
amaranthus_tricolor_g22273.t1 amaranthus_tricolor amaranthus_tricolor_g22273.t1
amaranthus_tricolor_g23161.t1 amaranthus_tricolor amaranthus_tricolor_g23161.t1
amaranthus_tricolor_g24216.t1 amaranthus_tricolor amaranthus_tricolor_g24216.t1
amaranthus_tricolor_g26733.t1 amaranthus_tricolor amaranthus_tricolor_g26733.t1
amaranthus_tricolor_g3192.t1 amaranthus_tricolor amaranthus_tricolor_g3192.t1
amaranthus_tricolor_g5055.t1 amaranthus_tricolor amaranthus_tricolor_g5055.t1
amaranthus_tricolor_g6872.t1 amaranthus_tricolor amaranthus_tricolor_g6872.t1
amaranthus_tricolor_g7151.t1 amaranthus_tricolor amaranthus_tricolor_g7151.t1
amaranthus_tricolor_g7562.t1 amaranthus_tricolor amaranthus_tricolor_g7562.t1
amaranthus_tricolor_g8055.t1 amaranthus_tricolor amaranthus_tricolor_g8055.t1
amaranthus_tricolor_g8459.t1 amaranthus_tricolor amaranthus_tricolor_g8459.t1
amaranthus_tricolor_g895.t1 amaranthus_tricolor amaranthus_tricolor_g895.t1
amaranthus_tricolor_g9144.t1 amaranthus_tricolor amaranthus_tricolor_g9144.t1
amaranthus_tricolor_g9396.t1 amaranthus_tricolor amaranthus_tricolor_g9396.t1
At.00g030170-v1.1.a1 amaranthus_tuberculatus At.00g030170-v1.1.a1
At.00g039700-v1.1.a1 amaranthus_tuberculatus At.00g039700-v1.1.a1
At.00g044980-v1.1.a1 amaranthus_tuberculatus At.00g044980-v1.1.a1
At.01g006080-v1.1.a1 amaranthus_tuberculatus At.01g006080-v1.1.a1
At.01g023270-v1.1.a1 amaranthus_tuberculatus At.01g023270-v1.1.a1
At.01g026970-v1.1.a1 amaranthus_tuberculatus At.01g026970-v1.1.a1
At.01g052720-v1.1.a1 amaranthus_tuberculatus At.01g052720-v1.1.a1
At.01g052980-v1.1.a1 amaranthus_tuberculatus At.01g052980-v1.1.a1