PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Abu5g_012400.1 atalantia_buxifolia Abu5g_012400.1
Abuxscaffold12970020250.1 atlantia_buxifolia Abuxscaffold12970020250.1
Abuxscaffold12970020250.2 atlantia_buxifolia Abuxscaffold12970020250.2
Abuxscaffold12970020250.3 atlantia_buxifolia Abuxscaffold12970020250.3
Abuxscaffold12970020250.4 atlantia_buxifolia Abuxscaffold12970020250.4
Abuxscaffold164110056500.1 atlantia_buxifolia Abuxscaffold164110056500.1
Abuxscaffold247710128080.1 atlantia_buxifolia Abuxscaffold247710128080.1
ANangscaffold_20066190 atrichum_angustatum ANangscaffold_20066190
ANangscaffold_60199610 atrichum_angustatum ANangscaffold_60199610
Aand3660176440 aulacomnium_androgynum Aand3660176440
Aand790257350 aulacomnium_androgynum Aand790257350
Apal6810204940 aulacomnium_palustre Apal6810204940
Apal7870221020 aulacomnium_palustre Apal7870221020
Aturscaffold_100055560 aulacomnium_turgidum Aturscaffold_100055560
Aturscaffold_40126880 aulacomnium_turgidum Aturscaffold_40126880
Aprocontig_KL6621620055070.1 auxenochlorella_protothecoides Aprocontig_KL6621620055070.1
AatlScoFOjO_1702_23380122010.1 avena_atlantica AatlScoFOjO_1702_23380122010.1
AatlScoFOjO_2069_27320306180.1 avena_atlantica AatlScoFOjO_2069_27320306180.1
AatlScoFOjO_324_4490347680.1 avena_atlantica AatlScoFOjO_324_4490347680.1
AatlScoFOjO_324_4490347700.1 avena_atlantica AatlScoFOjO_324_4490347700.1
AatlScoFOjO_350_4830442390.1 avena_atlantica AatlScoFOjO_350_4830442390.1
AatlScoFOjO_411_5600478020.1 avena_atlantica AatlScoFOjO_411_5600478020.1
AVeriSctCcfP_2331_44820264860.1 avena_eriantha AVeriSctCcfP_2331_44820264860.1
AVeriSctCcfP_670_13520427950.1 avena_eriantha AVeriSctCcfP_670_13520427950.1
AVeriSctCcfP_670_13520462640.1 avena_eriantha AVeriSctCcfP_670_13520462640.1
AVeriSctCcfP_670_13520462650.1 avena_eriantha AVeriSctCcfP_670_13520462650.1
AVESA.00010b.r1.1AG0030590.1 avena_sativa AVESA.00010b.r1.1AG0030590.1
AVESA.00010b.r1.2DG0329730.1 avena_sativa AVESA.00010b.r1.2DG0329730.1
AVESA.00010b.r1.2DG0387110.1 avena_sativa AVESA.00010b.r1.2DG0387110.1
AVESA.00010b.r1.4CG1293880.1 avena_sativa AVESA.00010b.r1.4CG1293880.1