PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
AVESA.00010b.r1.4CG1293920.1 avena_sativa AVESA.00010b.r1.4CG1293920.1
AVESA.00010b.r1.4CG1293930.1 avena_sativa AVESA.00010b.r1.4CG1293930.1
AVESA.00010b.r1.4DG0730600.1 avena_sativa AVESA.00010b.r1.4DG0730600.1
AVESA.00010b.r1.5AG0839680.1 avena_sativa AVESA.00010b.r1.5AG0839680.1
AVESA.00010b.r1.5DG0970190.1 avena_sativa AVESA.00010b.r1.5DG0970190.1
AVESA.00010b.r1.6CG1116190.1 avena_sativa AVESA.00010b.r1.6CG1116190.1
AVESA.00010b.r1.7AG1241120.1 avena_sativa AVESA.00010b.r1.7AG1241120.1
AVESA.00010b.r1.7AG1241140.1 avena_sativa AVESA.00010b.r1.7AG1241140.1
AVESA.00010b.r1.7DG1335810.1 avena_sativa AVESA.00010b.r1.7DG1335810.1
AVESA.00010b.r1.7DG1367730.1 avena_sativa AVESA.00010b.r1.7DG1367730.1
AVESA.00010b.r1.7DG1367740.1 avena_sativa AVESA.00010b.r1.7DG1367740.1
AVESA.00010b.r1.UnG1420800.1 avena_sativa AVESA.00010b.r1.UnG1420800.1
Acar09G0000270.1 averrhoa_carambola Acar09G0000270.1
Acar09G0000280.1 averrhoa_carambola Acar09G0000280.1
Acar09G0000290.1 averrhoa_carambola Acar09G0000290.1
Acar10G0004600.1 averrhoa_carambola Acar10G0004600.1
avicennia_marina_AM_21123 avicennia_marina avicennia_marina_AM_21123
balanophora_subcupularis_BAL03874 balanophora_subcupularis balanophora_subcupularis_BAL03874
balanophora_subcupularis_BAL14424 balanophora_subcupularis balanophora_subcupularis_BAL14424
BAvulContig24430096650.1 barbarea_vulgaris BAvulContig24430096650.1
BAvulContig7420224240.1 barbarea_vulgaris BAvulContig7420224240.1
BAampscaffold_20117270 barbula_amplexifolia BAampscaffold_20117270
BAampscaffold_60200420 barbula_amplexifolia BAampscaffold_60200420
Bith2590148630 bartramia_ithyphylla Bith2590148630
Bith260149220 bartramia_ithyphylla Bith260149220
Bith260149570 bartramia_ithyphylla Bith260149570
Bith260149580 bartramia_ithyphylla Bith260149580
Bathy03g02370 bathycoccus_prasinos Bathy03g02370
bauhinia_variegata_KAI4350306.1 bauhinia_variegata bauhinia_variegata_KAI4350306.1
Btri1163760017030 bazzania_tridens Btri1163760017030