TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
Bnigscaffold_75.10062220.1	brassica_nigra	Bnigscaffold_75.10062220.1
Bo3g143000.1	brassica_oleracea	Bo3g143000.1
Bo7g003620.1	brassica_oleracea	Bo7g003620.1
Bo7g003670.1	brassica_oleracea	Bo7g003670.1
Bo8g102400.1	brassica_oleracea	Bo8g102400.1
Bo9g028200.1	brassica_oleracea	Bo9g028200.1
Bra010909.1-P	brassica_rapa	Bra010909.1-P
Bra031116.1-P	brassica_rapa	Bra031116.1-P
Bra036465.1-P	brassica_rapa	Bra036465.1-P
Bra036466.1-P	brassica_rapa	Bra036466.1-P
Bra036683.1-P	brassica_rapa	Bra036683.1-P
Bra036684.1-P	brassica_rapa	Bra036684.1-P
bretschneidera_sinensis_BsiG0000456.1	bretschneidera_sinensis	bretschneidera_sinensis_BsiG0000456.1
bretschneidera_sinensis_BsiG0020228.1	bretschneidera_sinensis	bretschneidera_sinensis_BsiG0020228.1
bretschneidera_sinensis_BsiG0020229.1	bretschneidera_sinensis	bretschneidera_sinensis_BsiG0020229.1
bretschneidera_sinensis_BsiG0020521.1	bretschneidera_sinensis	bretschneidera_sinensis_BsiG0020521.1
bretschneidera_sinensis_BsiG0037350.1	bretschneidera_sinensis	bretschneidera_sinensis_BsiG0037350.1
bruguiera_cylindrica_evm.model.Scaffold_15_RagTag.739	bruguiera_cylindrica	bruguiera_cylindrica_evm.model.Scaffold_15_RagTag.739
bruguiera_cylindrica_evm.model.Scaffold_9_RagTag.926	bruguiera_cylindrica	bruguiera_cylindrica_evm.model.Scaffold_9_RagTag.926
bruguiera_parviflora_evm.model.Scaffold_15.697	bruguiera_parviflora	bruguiera_parviflora_evm.model.Scaffold_15.697
bruguiera_parviflora_evm.model.Scaffold_9.894	bruguiera_parviflora	bruguiera_parviflora_evm.model.Scaffold_9.894
bruguiera_sexangula_evm.model.Scaffold_15_RagTag.886	bruguiera_sexangula	bruguiera_sexangula_evm.model.Scaffold_15_RagTag.886
bruguiera_sexangula_evm.model.Scaffold_9_RagTag.1061	bruguiera_sexangula	bruguiera_sexangula_evm.model.Scaffold_9_RagTag.1061
Bnov2570029040	bryhnia_novae_angliae	Bnov2570029040
Bnov300037310	bryhnia_novae_angliae	Bnov300037310
Bnov300037460	bryhnia_novae_angliae	Bnov300037460
Bnov300037640	bryhnia_novae_angliae	Bnov300037640
Bnov300037650	bryhnia_novae_angliae	Bnov300037650
Bnov822460076990	bryhnia_novae_angliae	Bnov822460076990
Bill434170063360	bryoandersonia_illecebra	Bill434170063360