PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Bill436950078250 bryoandersonia_illecebra Bill436950078250
Bill437130079350 bryoandersonia_illecebra Bill437130079350
Bill446140161070 bryoandersonia_illecebra Bill446140161070
Bill448360189420 bryoandersonia_illecebra Bill448360189420
Bill448420190520 bryoandersonia_illecebra Bill448420190520
Bnorscaffold_130090960 bryoxiphium_norvegicum Bnorscaffold_130090960
Bnorscaffold_130090970 bryoxiphium_norvegicum Bnorscaffold_130090970
Bnorscaffold_140123820 bryoxiphium_norvegicum Bnorscaffold_140123820
Bknoscaffold_100032220 bryum_knowltonii Bknoscaffold_100032220
Bknoscaffold_230529050 bryum_knowltonii Bknoscaffold_230529050
Bknoscaffold_60618470 bryum_knowltonii Bknoscaffold_60618470
Baphcontig_5770239090 buxbaumia_aphylla Baphcontig_5770239090
Baphcontig_8710389580 buxbaumia_aphylla Baphcontig_8710389580
GWHPBHNJ008582 buxus_austroyunnanensis GWHPBHNJ008582
GWHPBHNJ018745 buxus_austroyunnanensis GWHPBHNJ018745
GWHPBHNJ020670 buxus_austroyunnanensis GWHPBHNJ020670
buxus_sinica_BUSI_019881-RA buxus_sinica buxus_sinica_BUSI_019881-RA
buxus_sinica_BUSI_019889-RA buxus_sinica buxus_sinica_BUSI_019889-RA
buxus_sinica_BUSI_021564-RA buxus_sinica buxus_sinica_BUSI_021564-RA
buxus_sinica_BUSI_022840-RA buxus_sinica buxus_sinica_BUSI_022840-RA
Ccaj02G0027760 cajanus_cajan Ccaj02G0027760
Ccaj08G0010920 cajanus_cajan Ccaj08G0010920
CcajScaffold1326220155070 cajanus_cajan CcajScaffold1326220155070
CcajScaffold1338210192300 cajanus_cajan CcajScaffold1338210192300
Csimscaffold1090020940 calamus_simplicifolius Csimscaffold1090020940
Csimscaffold6990434750 calamus_simplicifolius Csimscaffold6990434750
Csimscaffold7610452170 calamus_simplicifolius Csimscaffold7610452170
Csimscaffold8770481780 calamus_simplicifolius Csimscaffold8770481780
CAame08G0017410 callicarpa_americana CAame08G0017410
CAame08G0017420 callicarpa_americana CAame08G0017420