PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
CAame08G0017430 callicarpa_americana CAame08G0017430
CAame08G0017440 callicarpa_americana CAame08G0017440
CAame08G0017450 callicarpa_americana CAame08G0017450
CAame08G0017460 callicarpa_americana CAame08G0017460
CAame08G0017470 callicarpa_americana CAame08G0017470
Ccor2412980121210 calliergon_cordifolium Ccor2412980121210
Ccor2491790147000 calliergon_cordifolium Ccor2491790147000
Ccor2498600153460 calliergon_cordifolium Ccor2498600153460
Ccor2576770210620 calliergon_cordifolium Ccor2576770210620
Ccor2598800233000 calliergon_cordifolium Ccor2598800233000
Ccor2637770305900 calliergon_cordifolium Ccor2637770305900
Ccor780346110 calliergon_cordifolium Ccor780346110
Ccusscaffold_20078970 calliergonella_cuspidata Ccusscaffold_20078970
Ccusscaffold_40113000 calliergonella_cuspidata Ccusscaffold_40113000
Ccusscaffold_50156900 calliergonella_cuspidata Ccusscaffold_50156900
CpluGWHAMMO000000780019490.1 calohypnum_plumiforme CpluGWHAMMO000000780019490.1
CpluGWHAMMO000004660182670.1 calohypnum_plumiforme CpluGWHAMMO000004660182670.1
CpluGWHAMMO000004660182680.1 calohypnum_plumiforme CpluGWHAMMO000004660182680.1
CpluGWHAMMO000004660182690.1 calohypnum_plumiforme CpluGWHAMMO000004660182690.1
CpluGWHAMMO000006360230770.1 calohypnum_plumiforme CpluGWHAMMO000006360230770.1
CpluGWHAMMO000007370254010.1 calohypnum_plumiforme CpluGWHAMMO000007370254010.1
Cgigscaffold_1180036370 calotropis_gigantea Cgigscaffold_1180036370
Cgigscaffold_220089970 calotropis_gigantea Cgigscaffold_220089970
XP_010415917.1 camelina_sativa XP_010415917.1
XP_010415925.1 camelina_sativa XP_010415925.1
XP_010425844.1 camelina_sativa XP_010425844.1
XP_010460568.1 camelina_sativa XP_010460568.1
XP_010467842.1 camelina_sativa XP_010467842.1
XP_010467844.1 camelina_sativa XP_010467844.1
XP_010470705.1 camelina_sativa XP_010470705.1