PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Gphi389010257870 gollania_philippinensis Gphi389010257870
Gphi389160266800 gollania_philippinensis Gphi389160266800
Gphi389180267220 gollania_philippinensis Gphi389180267220
gossypium_anomalum_Gano_01G018160.1 gossypium_anomalum gossypium_anomalum_Gano_01G018160.1
gossypium_anomalum_Gano_01G019430.1 gossypium_anomalum gossypium_anomalum_Gano_01G019430.1
gossypium_anomalum_Gano_03G017230.1 gossypium_anomalum gossypium_anomalum_Gano_03G017230.1
gossypium_anomalum_Gano_05G017470.1 gossypium_anomalum gossypium_anomalum_Gano_05G017470.1
gossypium_anomalum_Gano_09G008470.1 gossypium_anomalum gossypium_anomalum_Gano_09G008470.1
gossypium_anomalum_Gano_12G000590.1 gossypium_anomalum gossypium_anomalum_Gano_12G000590.1
gossypium_anomalum_Gano_12G013240.1 gossypium_anomalum gossypium_anomalum_Gano_12G013240.1
Garb02G0006680 gossypium_arboreum Garb02G0006680
Garb06G0005650 gossypium_arboreum Garb06G0005650
Garb06G0032270 gossypium_arboreum Garb06G0032270
Garb07G0000950 gossypium_arboreum Garb07G0000950
Garb09G0022450 gossypium_arboreum Garb09G0022450
Garb10G0002090 gossypium_arboreum Garb10G0002090
Garb11G0019740 gossypium_arboreum Garb11G0019740
GbarA01G0015290 gossypium_barbadense GbarA01G0015290
GbarA01G0016570 gossypium_barbadense GbarA01G0016570
GbarA03G0013240 gossypium_barbadense GbarA03G0013240
GbarA05G0025580 gossypium_barbadense GbarA05G0025580
GbarA09G0018880 gossypium_barbadense GbarA09G0018880
GbarA12G0009250 gossypium_barbadense GbarA12G0009250
GbarA12G0017220 gossypium_barbadense GbarA12G0017220
GbarA12G0029270 gossypium_barbadense GbarA12G0029270
GbarD01G0016210 gossypium_barbadense GbarD01G0016210
GbarD01G0017510 gossypium_barbadense GbarD01G0017510
GbarD02G0015180 gossypium_barbadense GbarD02G0015180
GbarD05G0025820 gossypium_barbadense GbarD05G0025820
GbarD09G0018400 gossypium_barbadense GbarD09G0018400