PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
GbarA01G0020520 Alkaloid 16OMT medium borderline
GbarA03G0018110 Alkaloid 16OMT medium borderline
GbarA03G0018140 Alkaloid 16OMT medium borderline
GbarA03G0018150 Alkaloid 16OMT medium borderline
GbarA04G0015100 Alkaloid 16OMT medium borderline
GbarA04G0015110 Alkaloid 16OMT medium borderline
GbarA05G0007150 Alkaloid 16OMT medium borderline
GbarA05G0020310 Alkaloid 16OMT low borderline
GbarA06G0002020 Alkaloid 16OMT low borderline
GbarA06G0015550 Alkaloid 16OMT medium borderline
GbarA07G0017700 Alkaloid 16OMT medium borderline
GbarA08G0013220 Alkaloid 16OMT medium borderline
GbarA08G0024710 Alkaloid 16OMT medium borderline
GbarA09G0012820 Alkaloid 16OMT medium borderline
GbarA10G0010330 Alkaloid 16OMT medium borderline
GbarA10G0020890 Alkaloid 16OMT medium borderline
GbarA10G0020910 Alkaloid 16OMT medium borderline
GbarA10G0020940 Alkaloid 16OMT medium borderline
GbarA10G0020950 Alkaloid 16OMT medium borderline
GbarA10G0021810 Alkaloid 16OMT medium borderline
GbarA10G0021830 Alkaloid 16OMT medium borderline
GbarA10G0021840 Alkaloid 16OMT medium borderline
GbarA11G0033440 Alkaloid 16OMT medium borderline
GbarA12G0003440 Alkaloid 16OMT medium borderline
GbarA12G0003450 Alkaloid 16OMT medium borderline
GbarA12G0026140 Alkaloid 16OMT medium borderline
GbarA12G0026150 Alkaloid 16OMT medium borderline
GbarA12G0026560 Alkaloid 16OMT medium borderline
GbarD01G0021640 Alkaloid 16OMT medium borderline
GbarD02G0019750 Alkaloid 16OMT medium borderline
GbarD02G0019760 Alkaloid 16OMT medium borderline
GbarD02G0019780 Alkaloid 16OMT medium borderline
GbarD02G0019790 Alkaloid 16OMT medium borderline
GbarD04G0018520 Alkaloid 16OMT medium borderline
GbarD04G0018530 Alkaloid 16OMT medium borderline
GbarD04G0018540 Alkaloid 16OMT medium borderline
GbarD05G0007130 Alkaloid 16OMT medium borderline
GbarD05G0020620 Alkaloid 16OMT low borderline
GbarD06G0001870 Alkaloid 16OMT low borderline
GbarD06G0015230 Alkaloid 16OMT medium borderline
GbarD07G0017770 Alkaloid 16OMT medium borderline
GbarD07G0017780 Alkaloid 16OMT medium borderline
GbarD08G0012190 Alkaloid 16OMT medium borderline
GbarD08G0024790 Alkaloid 16OMT medium borderline
GbarD09G0012390 Alkaloid 16OMT medium borderline
GbarD10G0018530 Alkaloid 16OMT medium borderline
GbarD10G0022010 Alkaloid 16OMT medium borderline
GbarD10G0022020 Alkaloid 16OMT medium borderline
GbarD10G0022070 Alkaloid 16OMT medium borderline
GbarD10G0022800 Alkaloid 16OMT medium borderline