PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status
GbarA01G0005240 Steroid ROT3/CYP90C1 medium borderline
GbarA01G0005250 Steroid ROT3/CYP90C1 medium borderline
GbarA02G0019470 Steroid ROT3/CYP90C1 medium borderline
GbarA03G0002320 Steroid ROT3/CYP90C1 medium borderline
GbarA03G0002340 Steroid ROT3/CYP90C1 medium borderline
GbarA05G0022760 Steroid ROT3/CYP90C1 low borderline
GbarA06G0003890 Steroid ROT3/CYP90C1 low borderline
GbarA06G0018250 Steroid ROT3/CYP90C1 medium borderline
GbarA07G0008780 Steroid ROT3/CYP90C1 medium borderline
GbarA08G0018420 Steroid ROT3/CYP90C1 medium borderline
GbarA08G0018430 Steroid ROT3/CYP90C1 medium borderline
GbarA09G0002300 Steroid ROT3/CYP90C1 low borderline
GbarA10G0000550 Steroid ROT3/CYP90C1 low borderline
GbarA10G0013480 Steroid ROT3/CYP90C1 medium borderline
GbarA11G0018820 Steroid ROT3/CYP90C1 medium borderline
GbarA12G0024580 Steroid ROT3/CYP90C1 medium borderline
GbarA13G0001260 Steroid ROT3/CYP90C1 medium borderline
GbarD01G0005040 Steroid ROT3/CYP90C1 medium borderline
GbarD02G0017160 Steroid ROT3/CYP90C1 medium borderline
GbarD03G0001150 Steroid ROT3/CYP90C1 medium borderline
GbarD03G0013590 Steroid ROT3/CYP90C1 medium borderline
GbarD03G0017350 Steroid ROT3/CYP90C1 medium borderline
GbarD05G0013680 Steroid ROT3/CYP90C1 medium borderline
GbarD05G0015240 Steroid ROT3/CYP90C1 low borderline
GbarD05G0022960 Steroid ROT3/CYP90C1 low borderline
GbarD05G0038710 Steroid ROT3/CYP90C1 medium borderline
GbarD05G0038720 Steroid ROT3/CYP90C1 medium borderline
GbarD05G0038740 Steroid ROT3/CYP90C1 medium borderline
GbarD06G0003640 Steroid ROT3/CYP90C1 low borderline
GbarD06G0018550 Steroid ROT3/CYP90C1 medium borderline
GbarD07G0008790 Steroid ROT3/CYP90C1 medium borderline
GbarD09G0002260 Steroid ROT3/CYP90C1 low borderline
GbarD09G0020850 Steroid ROT3/CYP90C1 low borderline
GbarD10G0000610 Steroid ROT3/CYP90C1 low borderline
GbarD10G0015390 Steroid ROT3/CYP90C1 medium borderline
GbarD11G0019150 Steroid ROT3/CYP90C1 medium borderline
GbarD12G0024700 Steroid ROT3/CYP90C1 medium borderline
GbarD13G0001260 Steroid ROT3/CYP90C1 medium borderline
GbarD13G0006490 Steroid ROT3/CYP90C1 medium borderline
Gbarscaffold297_obj_D090003260 Steroid ROT3/CYP90C1 low borderline
Gbarscaffold297_obj_D090003280 Steroid ROT3/CYP90C1 low borderline