PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPR
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Gene Pathway Family Confidence Status Best Target
GbarA01G0012430 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
GbarA01G0024520 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
GbarA05G0000490 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
GbarA05G0021930 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
GbarA05G0038030 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
GbarA07G0012750 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
GbarA08G0002780 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
GbarA09G0018240 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
GbarD01G0013120 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
GbarD01G0025280 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
GbarD04G0012390 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
GbarD05G0000540 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
GbarD05G0022190 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
GbarD07G0012600 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
GbarD08G0002920 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
GbarD08G0011660 Rosmarinic Acid CPR medium pass CPR__00006__sp_Q7X7K8_NCPR1_ORYSJ
GbarD09G0017760 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
GbarD10G0015100 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
GbarD11G0001480 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
GbarD11G0013400 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN