PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
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Gene Pathway Family Confidence Status
GbarA02G0015180 Flavonoid DFR medium pass
GbarA02G0015640 Flavonoid DFR medium pass
GbarA03G0020880 Flavonoid DFR low borderline
GbarA05G0012060 Flavonoid DFR medium borderline
GbarA05G0027800 Flavonoid DFR medium borderline
GbarA07G0015820 Flavonoid DFR medium borderline
GbarA08G0010300 Flavonoid DFR medium borderline
GbarA08G0018140 Flavonoid DFR medium borderline
GbarA08G0023020 Flavonoid DFR medium borderline
GbarA08G0024220 Flavonoid DFR low borderline
GbarA12G0001080 Flavonoid DFR medium borderline
GbarA13G0012350 Flavonoid DFR low borderline
GbarD03G0005450 Flavonoid DFR medium borderline
GbarD03G0005460 Flavonoid DFR medium borderline
GbarD03G0005470 Flavonoid DFR medium borderline
GbarD03G0005580 Flavonoid DFR medium borderline
GbarD05G0027940 Flavonoid DFR medium borderline
GbarD05G0027950 Flavonoid DFR medium borderline
GbarD05G0027970 Flavonoid DFR low borderline
GbarD07G0015060 Flavonoid DFR medium borderline
GbarD08G0009830 Flavonoid DFR medium borderline
GbarD08G0013430 Flavonoid DFR medium borderline
GbarD08G0018340 Flavonoid DFR medium borderline
GbarD08G0023090 Flavonoid DFR medium borderline
GbarD08G0024280 Flavonoid DFR low borderline
GbarD12G0001160 Flavonoid DFR medium borderline
GbarD13G0011800 Flavonoid DFR low borderline