PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
GbarA01G0023160 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarA04G0009180 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
GbarA06G0008140 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
GbarA09G0016630 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarA10G0022580 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarA11G0037000 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD01G0023950 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD04G0012470 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD04G0012480 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD06G0007910 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
GbarD09G0016080 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD10G0023470 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD11G0037280 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarA01G0023160 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarA04G0009180 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
GbarA06G0008140 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
GbarA09G0016630 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarA10G0022580 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarA11G0037000 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD01G0023950 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD04G0012470 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD04G0012480 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD06G0007910 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
GbarD09G0016080 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD10G0023470 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD11G0037280 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarA01G0023160 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarA04G0009180 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
GbarA06G0008140 Rosmarinic Acid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
GbarA09G0016630 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarA10G0022580 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarA11G0037000 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD01G0023950 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD04G0012470 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD04G0012480 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD06G0007910 Rosmarinic Acid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
GbarD09G0016080 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD10G0023470 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
GbarD11G0037280 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR