PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
GbarA03G0006640 Alkaloid PMT low borderline
GbarA03G0016230 Alkaloid PMT medium borderline
GbarA05G0005620 Alkaloid PMT low borderline
GbarA05G0011870 Alkaloid PMT low borderline
GbarA05G0018010 Alkaloid PMT low borderline
GbarA05G0034640 Alkaloid PMT low borderline
GbarA05G0035240 Alkaloid PMT medium pass
GbarA06G0009010 Alkaloid PMT medium pass
GbarA07G0006790 Alkaloid PMT medium borderline
GbarA08G0010600 Alkaloid PMT medium borderline
GbarA08G0019070 Alkaloid PMT low borderline
GbarA08G0022340 Alkaloid PMT medium borderline
GbarA10G0007070 Alkaloid PMT medium pass
GbarA10G0012560 Alkaloid PMT low borderline
GbarA10G0026480 Alkaloid PMT low borderline
GbarA11G0010850 Alkaloid PMT medium pass
GbarA12G0027040 Alkaloid PMT medium borderline
GbarA13G0012450 Alkaloid PMT medium pass
GbarA13G0012460 Alkaloid PMT medium pass
GbarA13G0018590 Alkaloid PMT low borderline
GbarD02G0017910 Alkaloid PMT medium borderline
GbarD04G0007220 Alkaloid PMT low borderline
GbarD04G0007720 Alkaloid PMT medium pass
GbarD05G0005410 Alkaloid PMT low borderline
GbarD05G0005430 Alkaloid PMT low borderline
GbarD05G0005530 Alkaloid PMT low borderline
GbarD05G0011870 Alkaloid PMT low borderline
GbarD05G0018350 Alkaloid PMT low borderline
GbarD06G0009130 Alkaloid PMT medium pass
GbarD07G0006700 Alkaloid PMT medium borderline
GbarD07G0025680 Alkaloid PMT low borderline
GbarD08G0011180 Alkaloid PMT medium borderline
GbarD08G0019190 Alkaloid PMT low borderline
GbarD10G0008750 Alkaloid PMT medium pass
GbarD10G0016250 Alkaloid PMT low borderline
GbarD10G0027530 Alkaloid PMT low borderline
GbarD11G0002750 Alkaloid PMT low borderline
GbarD11G0011140 Alkaloid PMT medium pass
GbarD11G0025160 Alkaloid PMT medium pass
GbarD11G0025200 Alkaloid PMT low borderline
GbarD12G0027300 Alkaloid PMT medium borderline
GbarD13G0011710 Alkaloid PMT medium pass
GbarD13G0018090 Alkaloid PMT medium pass
GbarD13G0018100 Alkaloid PMT low borderline