PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status Best Target
GbarA01G0008160 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarA03G0022040 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarA05G0019170 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarA07G0008240 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarA10G0019530 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarA10G0019550 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarA12G0006310 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarA12G0006320 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarA13G0002690 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarA13G0002700 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarA13G0024200 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarA13G0024210 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarD01G0008270 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarD02G0023750 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarD05G0019540 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarD07G0008250 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarD10G0020450 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarD10G0020540 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarD11G0018500 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarD12G0006470 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarD13G0002660 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarD13G0002670 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GbarD13G0024130 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO