PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
GbarA01G0012420 Rosmarinic Acid RAS low borderline
GbarA01G0017990 Rosmarinic Acid RAS low borderline
GbarA02G0009730 Rosmarinic Acid RAS low borderline
GbarA03G0006640 Rosmarinic Acid RAS medium pass
GbarA04G0006100 Rosmarinic Acid RAS low borderline
GbarA05G0005620 Rosmarinic Acid RAS medium pass
GbarA05G0009290 Rosmarinic Acid RAS low borderline
GbarA05G0011870 Rosmarinic Acid RAS medium pass
GbarA05G0018480 Rosmarinic Acid RAS low borderline
GbarA05G0025680 Rosmarinic Acid RAS low borderline
GbarA05G0034640 Rosmarinic Acid RAS medium pass
GbarA06G0000200 Rosmarinic Acid RAS low borderline
GbarA06G0000700 Rosmarinic Acid RAS low borderline
GbarA06G0001990 Rosmarinic Acid RAS low borderline
GbarA06G0006540 Rosmarinic Acid RAS low borderline
GbarA06G0006940 Rosmarinic Acid RAS low borderline
GbarA06G0015620 Rosmarinic Acid RAS low borderline
GbarA06G0022080 Rosmarinic Acid RAS medium pass
GbarA06G0022090 Rosmarinic Acid RAS medium pass
GbarA06G0022170 Rosmarinic Acid RAS medium pass
GbarA06G0022880 Rosmarinic Acid RAS low borderline
GbarA07G0005500 Rosmarinic Acid RAS medium pass
GbarA08G0006290 Rosmarinic Acid RAS low borderline
GbarA10G0003090 Rosmarinic Acid RAS low borderline
GbarA10G0015830 Rosmarinic Acid RAS medium pass
GbarA10G0015960 Rosmarinic Acid RAS medium pass
GbarA10G0026480 Rosmarinic Acid RAS medium pass
GbarA11G0010850 Rosmarinic Acid RAS low borderline
GbarA11G0018110 Rosmarinic Acid RAS low borderline
GbarA12G0003620 Rosmarinic Acid RAS low borderline
GbarA12G0029660 Rosmarinic Acid RAS low borderline
GbarA13G0012450 Rosmarinic Acid RAS medium pass
GbarA13G0012460 Rosmarinic Acid RAS medium pass
GbarA13G0020970 Rosmarinic Acid RAS low borderline
GbarD01G0013110 Rosmarinic Acid RAS low borderline
GbarD01G0019170 Rosmarinic Acid RAS low borderline
GbarD02G0010130 Rosmarinic Acid RAS low borderline
GbarD03G0000770 Rosmarinic Acid RAS low borderline
GbarD04G0007220 Rosmarinic Acid RAS low borderline
GbarD04G0010360 Rosmarinic Acid RAS low borderline
GbarD05G0005410 Rosmarinic Acid RAS medium pass
GbarD05G0005430 Rosmarinic Acid RAS medium pass
GbarD05G0005530 Rosmarinic Acid RAS medium pass
GbarD05G0009210 Rosmarinic Acid RAS low borderline
GbarD05G0011870 Rosmarinic Acid RAS medium pass
GbarD05G0018850 Rosmarinic Acid RAS low borderline
GbarD05G0025910 Rosmarinic Acid RAS low borderline
GbarD06G0000050 Rosmarinic Acid RAS low borderline
GbarD06G0000560 Rosmarinic Acid RAS low borderline
GbarD06G0001810 Rosmarinic Acid RAS low borderline