PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
GbarA01G0005540 Alkaloid 7DLGT low borderline
GbarA01G0005550 Alkaloid 7DLGT low borderline
GbarA01G0005560 Alkaloid 7DLGT low borderline
GbarA01G0005730 Alkaloid 7DLGT low borderline
GbarA01G0007530 Alkaloid 7DLGT medium pass
GbarA01G0012980 Alkaloid 7DLGT low borderline
GbarA01G0015030 Alkaloid 7DLGT medium pass
GbarA01G0021120 Alkaloid 7DLGT low borderline
GbarA02G0000680 Alkaloid 7DLGT medium pass
GbarA02G0001380 Alkaloid 7DLGT low borderline
GbarA02G0003320 Alkaloid 7DLGT medium pass
GbarA02G0006330 Alkaloid 7DLGT high pass
GbarA02G0006350 Alkaloid 7DLGT low borderline
GbarA02G0006360 Alkaloid 7DLGT medium pass
GbarA02G0011690 Alkaloid 7DLGT medium pass
GbarA02G0016500 Alkaloid 7DLGT low borderline
GbarA02G0016730 Alkaloid 7DLGT medium pass
GbarA02G0016740 Alkaloid 7DLGT medium pass
GbarA02G0019020 Alkaloid 7DLGT medium pass
GbarA03G0002750 Alkaloid 7DLGT high pass
GbarA03G0004060 Alkaloid 7DLGT medium pass
GbarA03G0006230 Alkaloid 7DLGT medium pass
GbarA03G0006250 Alkaloid 7DLGT low borderline
GbarA03G0006260 Alkaloid 7DLGT low borderline
GbarA03G0008600 Alkaloid 7DLGT low borderline
GbarA03G0008610 Alkaloid 7DLGT low borderline
GbarA03G0020960 Alkaloid 7DLGT low borderline
GbarA03G0020970 Alkaloid 7DLGT low borderline
GbarA03G0020980 Alkaloid 7DLGT medium pass
GbarA04G0000390 Alkaloid 7DLGT high pass
GbarA04G0008730 Alkaloid 7DLGT low borderline
GbarA04G0008740 Alkaloid 7DLGT medium pass
GbarA04G0008760 Alkaloid 7DLGT medium pass
GbarA04G0010550 Alkaloid 7DLGT medium pass
GbarA04G0017410 Alkaloid 7DLGT low borderline
GbarA04G0017420 Alkaloid 7DLGT low borderline
GbarA05G0003130 Alkaloid 7DLGT low borderline
GbarA05G0003140 Alkaloid 7DLGT low borderline
GbarA05G0003210 Alkaloid 7DLGT low borderline
GbarA05G0004920 Alkaloid 7DLGT low borderline
GbarA05G0006890 Alkaloid 7DLGT low borderline
GbarA05G0006900 Alkaloid 7DLGT low borderline
GbarA05G0010970 Alkaloid 7DLGT medium pass
GbarA05G0022550 Alkaloid 7DLGT high pass
GbarA05G0030980 Alkaloid 7DLGT high pass
GbarA05G0031600 Alkaloid 7DLGT medium pass
GbarA05G0034030 Alkaloid 7DLGT medium pass
GbarA05G0036540 Alkaloid 7DLGT high pass
GbarA05G0036560 Alkaloid 7DLGT medium pass
GbarA05G0039010 Alkaloid 7DLGT low borderline