PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
GbarA01G0007610 Steroid CYP90D1 medium borderline
GbarA01G0008440 Steroid CYP90D1 low borderline
GbarA01G0021190 Steroid CYP90D1 low borderline
GbarA02G0002470 Steroid CYP90D1 low borderline
GbarA02G0002490 Steroid CYP90D1 low borderline
GbarA02G0002540 Steroid CYP90D1 low borderline
GbarA02G0002560 Steroid CYP90D1 low borderline
GbarA02G0002570 Steroid CYP90D1 low borderline
GbarA02G0006960 Steroid CYP90D1 medium borderline
GbarA04G0001870 Steroid CYP90D1 low borderline
GbarA04G0005230 Steroid CYP90D1 low borderline
GbarA04G0005250 Steroid CYP90D1 low borderline
GbarA04G0005260 Steroid CYP90D1 low borderline
GbarA04G0008490 Steroid CYP90D1 low borderline
GbarA04G0015670 Steroid CYP90D1 low borderline
GbarA04G0015680 Steroid CYP90D1 low borderline
GbarA04G0017450 Steroid CYP90D1 low borderline
GbarA04G0017460 Steroid CYP90D1 low borderline
GbarA05G0006460 Steroid CYP90D1 low borderline
GbarA05G0013640 Steroid CYP90D1 medium borderline
GbarA05G0019520 Steroid CYP90D1 low borderline
GbarA05G0019830 Steroid CYP90D1 low borderline
GbarA05G0019900 Steroid CYP90D1 low borderline
GbarA05G0041570 Steroid CYP90D1 low borderline
GbarA05G0041730 Steroid CYP90D1 low borderline
GbarA06G0001370 Steroid CYP90D1 low borderline
GbarA06G0018900 Steroid CYP90D1 medium borderline
GbarA07G0006230 Steroid CYP90D1 low borderline
GbarA07G0010200 Steroid CYP90D1 low borderline
GbarA07G0010210 Steroid CYP90D1 low borderline
GbarA08G0020130 Steroid CYP90D1 medium borderline
GbarA08G0020180 Steroid CYP90D1 low borderline
GbarA08G0020230 Steroid CYP90D1 low borderline
GbarA08G0027290 Steroid CYP90D1 low borderline
GbarA09G0001870 Steroid CYP90D1 low borderline
GbarA09G0014180 Steroid CYP90D1 low borderline
GbarA09G0014210 Steroid CYP90D1 low borderline
GbarA09G0014220 Steroid CYP90D1 low borderline
GbarA10G0001320 Steroid CYP90D1 medium pass
GbarA10G0005490 Steroid CYP90D1 low borderline
GbarA10G0026030 Steroid CYP90D1 medium borderline
GbarA11G0014020 Steroid CYP90D1 low borderline
GbarA11G0016140 Steroid CYP90D1 low borderline
GbarA11G0019260 Steroid CYP90D1 medium borderline
GbarA12G0002790 Steroid CYP90D1 low borderline
GbarA12G0011470 Steroid CYP90D1 low borderline
GbarA12G0016500 Steroid CYP90D1 low borderline
GbarA12G0020990 Steroid CYP90D1 low borderline
GbarA13G0002370 Steroid CYP90D1 low borderline
GbarA13G0003780 Steroid CYP90D1 low borderline