PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
GbarA02G0001870 Alkaloid BBE medium borderline
GbarA02G0001910 Alkaloid BBE medium borderline
GbarA02G0009150 Alkaloid BBE medium borderline
GbarA02G0009160 Alkaloid BBE medium borderline
GbarA04G0015920 Alkaloid BBE medium borderline
GbarA04G0015930 Alkaloid BBE medium borderline
GbarA04G0015940 Alkaloid BBE medium borderline
GbarA06G0011520 Alkaloid BBE medium borderline
GbarA06G0020900 Alkaloid BBE medium borderline
GbarA06G0020910 Alkaloid BBE medium borderline
GbarA06G0020930 Alkaloid BBE medium borderline
GbarA07G0006870 Alkaloid BBE medium borderline
GbarA07G0006880 Alkaloid BBE medium borderline
GbarA09G0014790 Alkaloid BBE low borderline
GbarA09G0019530 Alkaloid BBE medium borderline
GbarA09G0022420 Alkaloid BBE medium borderline
GbarA10G0000620 Alkaloid BBE medium borderline
GbarA10G0000640 Alkaloid BBE medium borderline
GbarA10G0014150 Alkaloid BBE medium borderline
GbarA10G0016090 Alkaloid BBE medium borderline
GbarA10G0016920 Alkaloid BBE medium borderline
GbarA11G0000950 Alkaloid BBE medium borderline
GbarA11G0000960 Alkaloid BBE medium borderline
GbarA11G0000970 Alkaloid BBE medium borderline
GbarA11G0000980 Alkaloid BBE medium borderline
GbarD02G0001980 Alkaloid BBE medium borderline
GbarD02G0001990 Alkaloid BBE medium borderline
GbarD02G0002000 Alkaloid BBE medium borderline
GbarD02G0002010 Alkaloid BBE medium borderline
GbarD02G0002020 Alkaloid BBE medium borderline
GbarD02G0011210 Alkaloid BBE medium borderline
GbarD02G0011260 Alkaloid BBE medium borderline
GbarD04G0019410 Alkaloid BBE medium borderline
GbarD05G0011310 Alkaloid BBE medium borderline
GbarD06G0013750 Alkaloid BBE medium borderline
GbarD06G0021300 Alkaloid BBE medium borderline
GbarD06G0021310 Alkaloid BBE medium borderline
GbarD06G0021330 Alkaloid BBE medium borderline
GbarD07G0006780 Alkaloid BBE medium borderline
GbarD07G0006790 Alkaloid BBE medium borderline
GbarD09G0014320 Alkaloid BBE low borderline
GbarD09G0021730 Alkaloid BBE medium borderline
GbarD10G0000680 Alkaloid BBE medium borderline
GbarD10G0000690 Alkaloid BBE medium borderline
GbarD10G0000700 Alkaloid BBE medium borderline
GbarD10G0000710 Alkaloid BBE medium borderline
GbarD10G0000720 Alkaloid BBE medium borderline
GbarD10G0000740 Alkaloid BBE medium borderline
GbarD10G0000750 Alkaloid BBE medium borderline
GbarD10G0000760 Alkaloid BBE medium borderline