PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SQE
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Gene Pathway Family Confidence Status Best Target
GbarA01G0012210 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarA02G0017540 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarA03G0023740 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarA04G0015510 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
GbarA04G0015520 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarA04G0015530 Steroid SQE medium pass SQE__00004__sp_Q8VYH2_ERG16_ARATH
GbarA04G0015540 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
GbarA04G0015550 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarA04G0015560 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarA04G0015570 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarA05G0021310 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarA06G0002680 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarA11G0022480 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarD01G0012890 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarD01G0020410 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
GbarD02G0025450 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarD03G0003090 Steroid SQE medium pass SQE__00004__sp_Q8VYH2_ERG16_ARATH
GbarD04G0018930 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
GbarD04G0018940 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarD04G0018950 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
GbarD04G0018960 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarD05G0021620 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarD06G0002520 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
GbarD11G0021970 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
Gbarscaffold4874_obj0005770 Steroid SQE medium pass SQE__00004__sp_Q8VYH2_ERG16_ARATH
Gbarscaffold7085_obj0007120 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI