PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
GbarA01G0019520 Flavonoid C4H low borderline
GbarA02G0002470 Flavonoid C4H medium borderline
GbarA02G0002490 Flavonoid C4H medium borderline
GbarA02G0002500 Flavonoid C4H medium borderline
GbarA02G0002540 Flavonoid C4H medium borderline
GbarA02G0002560 Flavonoid C4H medium borderline
GbarA04G0017450 Flavonoid C4H medium borderline
GbarA04G0017460 Flavonoid C4H medium borderline
GbarA06G0020640 Flavonoid C4H low borderline
GbarA08G0020220 Flavonoid C4H low borderline
GbarA10G0019440 Flavonoid C4H medium borderline
GbarA10G0021690 Flavonoid C4H medium borderline
GbarA13G0003780 Flavonoid C4H medium borderline
GbarA13G0006080 Flavonoid C4H low borderline
GbarA13G0006110 Flavonoid C4H medium borderline
GbarA13G0009250 Flavonoid C4H medium borderline
GbarD02G0002720 Flavonoid C4H medium borderline
GbarD02G0002740 Flavonoid C4H medium borderline
GbarD02G0002750 Flavonoid C4H medium borderline
GbarD02G0002770 Flavonoid C4H medium borderline
GbarD02G0002780 Flavonoid C4H medium borderline
GbarD02G0002790 Flavonoid C4H medium borderline
GbarD02G0002800 Flavonoid C4H medium borderline
GbarD04G0020940 Flavonoid C4H medium borderline
GbarD04G0020950 Flavonoid C4H medium borderline
GbarD06G0021040 Flavonoid C4H low borderline
GbarD07G0020690 Flavonoid C4H medium borderline
GbarD08G0020330 Flavonoid C4H low borderline
GbarD10G0020390 Flavonoid C4H medium borderline
GbarD10G0022710 Flavonoid C4H medium borderline
GbarD13G0003690 Flavonoid C4H medium borderline
GbarD13G0006490 Flavonoid C4H medium borderline
GbarD13G0008810 Flavonoid C4H medium borderline
GbarD13G0008840 Flavonoid C4H medium borderline
GbarD13G0026250 Flavonoid C4H medium borderline
GbarA01G0003960 Rosmarinic Acid C4H low borderline
GbarA01G0003970 Rosmarinic Acid C4H low borderline
GbarA01G0003980 Rosmarinic Acid C4H low borderline
GbarA01G0006250 Rosmarinic Acid C4H medium pass
GbarA01G0006260 Rosmarinic Acid C4H low borderline
GbarA01G0007610 Rosmarinic Acid C4H low borderline
GbarA01G0008440 Rosmarinic Acid C4H low borderline
GbarA01G0008450 Rosmarinic Acid C4H medium pass
GbarA01G0008480 Rosmarinic Acid C4H low borderline
GbarA01G0008500 Rosmarinic Acid C4H low borderline
GbarA01G0008520 Rosmarinic Acid C4H low borderline
GbarA01G0008540 Rosmarinic Acid C4H medium pass
GbarA01G0008550 Rosmarinic Acid C4H low borderline
GbarA01G0008560 Rosmarinic Acid C4H low borderline
GbarA01G0009120 Rosmarinic Acid C4H low borderline