PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
GbarA01G0023950 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA01G0024410 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA02G0006710 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA02G0015760 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA03G0003540 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA03G0005620 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA03G0005640 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA03G0006100 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA03G0007940 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA03G0007970 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA04G0010580 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA04G0010590 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA04G0010610 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA04G0010630 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA05G0009110 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA05G0010020 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA05G0010060 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA05G0018580 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
GbarA05G0024790 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA05G0024800 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA05G0024810 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA05G0024820 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
GbarA05G0024960 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA05G0024970 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA05G0024980 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA05G0024990 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA05G0025000 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA05G0025010 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA05G0027390 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA05G0029520 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
GbarA05G0029530 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
GbarA05G0031040 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA05G0031180 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA06G0012860 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
GbarA06G0018570 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA06G0018590 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA08G0022440 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA08G0023040 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA09G0017130 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA10G0009340 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA10G0009580 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA10G0025320 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA10G0026330 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA11G0004860 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA11G0010280 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA11G0019400 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
GbarA11G0019780 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA11G0019790 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
GbarA11G0037300 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
GbarA11G0037320 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH