PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
jgi|Chlsc1|3286|g6190.t2 chlamydomonas_schloesseri jgi|Chlsc1|3286|g6190.t2
Cses05G0013960.1 chloranthus_sessilifolius Cses05G0013960.1
Cses07G0006160.1 chloranthus_sessilifolius Cses07G0006160.1
Catmscaffold158_pilon0017180 chlorokybus_atmophyticus Catmscaffold158_pilon0017180
Cacid2446250157360 chorisodontium_acidophyllum Cacid2446250157360
Cacid2509960268300 chorisodontium_acidophyllum Cacid2509960268300
Cacipscaffold_1430025290 chorisodontium_aciphyllum Cacipscaffold_1430025290
Cacipscaffold_1720047730 chorisodontium_aciphyllum Cacipscaffold_1720047730
Czof01G0012080.1 chromochloris_zofingiensis Czof01G0012080.1
Cnanutg13021_pilon_pilon0041530.1 chrysanthemum_nankingense Cnanutg13021_pilon_pilon0041530.1
Cnanutg13021_pilon_pilon0041550.1 chrysanthemum_nankingense Cnanutg13021_pilon_pilon0041550.1
Cnanutg13021_pilon_pilon0041560.1 chrysanthemum_nankingense Cnanutg13021_pilon_pilon0041560.1
Cnanutg23579_pilon_pilon0207980.1 chrysanthemum_nankingense Cnanutg23579_pilon_pilon0207980.1
Cnanutg51177_pilon_pilon0414980.1 chrysanthemum_nankingense Cnanutg51177_pilon_pilon0414980.1
Cnanutg5369_pilon_pilon0426760.1 chrysanthemum_nankingense Cnanutg5369_pilon_pilon0426760.1
Cnanutg60947_pilon_pilon0458490.1 chrysanthemum_nankingense Cnanutg60947_pilon_pilon0458490.1
Cnanutg61279_pilon_pilon0459870.1 chrysanthemum_nankingense Cnanutg61279_pilon_pilon0459870.1
Cnanutg80030_pilon_pilon0519120.1 chrysanthemum_nankingense Cnanutg80030_pilon_pilon0519120.1
CsetCse_sc000970.10101770 chrysanthemum_seticuspe CsetCse_sc000970.10101770
CsetCse_sc007051.10449050 chrysanthemum_seticuspe CsetCse_sc007051.10449050
CsetCse_sc009326.10544290 chrysanthemum_seticuspe CsetCse_sc009326.10544290
CsetCse_sc009326.10544310 chrysanthemum_seticuspe CsetCse_sc009326.10544310
CsetCse_sc009326.10544330 chrysanthemum_seticuspe CsetCse_sc009326.10544330
CsetCse_sc017210.10799270 chrysanthemum_seticuspe CsetCse_sc017210.10799270
CsetCse_sc035657.11160710 chrysanthemum_seticuspe CsetCse_sc035657.11160710
Cari03G0004240.1 cicer_arietinum Cari03G0004240.1
Cari03G0019040.1 cicer_arietinum Cari03G0019040.1
Cr_10495.1|Cr_LG_4:35866919-35867538|minus| cicer_reticulatum Cr_10495.1|Cr_LG_4:35866919-35867538|minus|
cinchona_pubescens_g38119.t1 cinchona_pubescens cinchona_pubescens_g38119.t1
cinnamomum_camphora_GWHPBGXC009340 cinnamomum_camphora cinnamomum_camphora_GWHPBGXC009340