PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
cinnamomum_camphora_GWHPBGXC010233 cinnamomum_camphora cinnamomum_camphora_GWHPBGXC010233
cinnamomum_camphora_GWHPBGXC019942 cinnamomum_camphora cinnamomum_camphora_GWHPBGXC019942
cinnamomum_camphora_GWHPBGXC023487 cinnamomum_camphora cinnamomum_camphora_GWHPBGXC023487
CkanCKAN.scaff00030090950.1 cinnamomum_kanehirae CkanCKAN.scaff00030090950.1
CkanCKAN.scaff00050132260.1 cinnamomum_kanehirae CkanCKAN.scaff00050132260.1
CkanCKAN.scaff00050141190.1 cinnamomum_kanehirae CkanCKAN.scaff00050141190.1
CkanCKAN.scaff00070178310.1 cinnamomum_kanehirae CkanCKAN.scaff00070178310.1
CkanCKAN.scaff00070178360.1 cinnamomum_kanehirae CkanCKAN.scaff00070178360.1
CkanCKAN.scaff00080200520.1 cinnamomum_kanehirae CkanCKAN.scaff00080200520.1
CkanCKAN.scaff00080200550.1 cinnamomum_kanehirae CkanCKAN.scaff00080200550.1
cissus_rotundifolia_CRGY0205257.1 cissus_rotundifolia cissus_rotundifolia_CRGY0205257.1
cissus_rotundifolia_CRGY0205258.1 cissus_rotundifolia cissus_rotundifolia_CRGY0205258.1
cissus_rotundifolia_CRGY0205263.1 cissus_rotundifolia cissus_rotundifolia_CRGY0205263.1
cissus_rotundifolia_CRGY0207146.1 cissus_rotundifolia cissus_rotundifolia_CRGY0207146.1
citrullus_lanatus_ClG42_07g0013600.10 citrullus_lanatus citrullus_lanatus_ClG42_07g0013600.10
citrus_australis_GWHPBQDX000420 citrus_australis citrus_australis_GWHPBQDX000420
citrus_australis_GWHPBQDX000421 citrus_australis citrus_australis_GWHPBQDX000421
citrus_australis_GWHPBQDX004633 citrus_australis citrus_australis_GWHPBQDX004633
citrus_australis_GWHPBQDX017271 citrus_australis citrus_australis_GWHPBQDX017271
citrus_australis_GWHPBQDX017555 citrus_australis citrus_australis_GWHPBQDX017555
Cclescaffold_20039310.1 citrus_clementina Cclescaffold_20039310.1
Cclescaffold_30090990.1 citrus_clementina Cclescaffold_30090990.1
CIgra01G0026650.1 citrus_grandis CIgra01G0026650.1
CIgra02G0015090.1 citrus_grandis CIgra02G0015090.1
CIgra05G0033180.1 citrus_grandis CIgra05G0033180.1
CIgra05G0033180.2 citrus_grandis CIgra05G0033180.2
Cichscaffold_4360208260.2 citrus_ichangensis Cichscaffold_4360208260.2
citrus_limon_GWHPCBFQ005608.1 citrus_limon citrus_limon_GWHPCBFQ005608.1
citrus_limon_GWHPCBFQ007543.1 citrus_limon citrus_limon_GWHPCBFQ007543.1
citrus_limon_GWHPCBFQ011754.1 citrus_limon citrus_limon_GWHPCBFQ011754.1