TDC

Atlas summary family TDC.

Lineage Coverage

Detected in 29 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Miscanthus lutarioriparius

Chrysanthemum seticuspe

Zoysia matrella

Aegilops tauschii

Related Modules

Alkaloid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
citrus_limon_GWHPCBFQ031677.1	citrus_limon	citrus_limon_GWHPCBFQ031677.1
citrus_limon_GWHPCBFQ036735.1	citrus_limon	citrus_limon_GWHPCBFQ036735.1
Cmedscaffold_2050097100.1	citrus_medica	Cmedscaffold_2050097100.1
Cmedscaffold_3320163770.1	citrus_medica	Cmedscaffold_3320163770.1
Cmedscaffold_3320163770.2	citrus_medica	Cmedscaffold_3320163770.2
Cmedscaffold_3320163770.3	citrus_medica	Cmedscaffold_3320163770.3
Cretscaffold132_cov940017410.1	citrus_reticulata	Cretscaffold132_cov940017410.1
Cretscaffold132_cov940017410.2	citrus_reticulata	Cretscaffold132_cov940017410.2
Cretscaffold132_cov940017410.3	citrus_reticulata	Cretscaffold132_cov940017410.3
Cretscaffold181_cov890026980.1	citrus_reticulata	Cretscaffold181_cov890026980.1
Csinscaffold000600116510.1	citrus_sinensis	Csinscaffold000600116510.1
Csinscaffold001080141270.1	citrus_sinensis	Csinscaffold001080141270.1
Csinscaffold047700236750.1	citrus_sinensis	Csinscaffold047700236750.1
CLchi11G0004900.1	cladopus_chinensis	CLchi11G0004900.1
CLchiGWHACFD000004010021870.1	cladopus_chinensis	CLchiGWHACFD000004010021870.1
CsonA3G0013210.1	cleistogenes_songorica	CsonA3G0013210.1
CsonA6G0003290.1	cleistogenes_songorica	CsonA6G0003290.1
CsonA6G0003310.1	cleistogenes_songorica	CsonA6G0003310.1
CsonA6G0003320.1	cleistogenes_songorica	CsonA6G0003320.1
CsonA7G0005720.1	cleistogenes_songorica	CsonA7G0005720.1
CsonA8G0012320.1	cleistogenes_songorica	CsonA8G0012320.1
CsonB1G0013160.1	cleistogenes_songorica	CsonB1G0013160.1
CsonB2G0013130.1	cleistogenes_songorica	CsonB2G0013130.1
CsonB6G0017180.1	cleistogenes_songorica	CsonB6G0017180.1
CsonB6G0017190.1	cleistogenes_songorica	CsonB6G0017190.1
CsonB6G0017210.1	cleistogenes_songorica	CsonB6G0017210.1
CsonB7G0007400.1	cleistogenes_songorica	CsonB7G0007400.1
CsonB7G0007770.1	cleistogenes_songorica	CsonB7G0007770.1
CsonB7G0007780.1	cleistogenes_songorica	CsonB7G0007780.1
Carb968390174300.1	clethra_arborea	Carb968390174300.1