PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
hydrangea_macrophylla_Hma1.2p1_0616F.1_g190000 hydrangea_macrophylla hydrangea_macrophylla_Hma1.2p1_0616F.1_g190000
hydrangea_macrophylla_Hma1.2p1_0689F.1_g203820 hydrangea_macrophylla hydrangea_macrophylla_Hma1.2p1_0689F.1_g203820
hydrangea_macrophylla_Hma1.2p1_0876F.1_g231586 hydrangea_macrophylla hydrangea_macrophylla_Hma1.2p1_0876F.1_g231586
HvarHygva1350034620 hygroamblystegium_varium HvarHygva1350034620
HvarHygva1491380058780 hygroamblystegium_varium HvarHygva1491380058780
HvarHygva1521160069100 hygroamblystegium_varium HvarHygva1521160069100
HvarHygva1557570103110 hygroamblystegium_varium HvarHygva1557570103110
HvarHygva1566760126640 hygroamblystegium_varium HvarHygva1566760126640
HvarHygva1575690157400 hygroamblystegium_varium HvarHygva1575690157400
HvarHygva1583610183820 hygroamblystegium_varium HvarHygva1583610183820
HvarHygva16190213100 hygroamblystegium_varium HvarHygva16190213100
HvarHygva18800285540 hygroamblystegium_varium HvarHygva18800285540
HvarHygva21740312730 hygroamblystegium_varium HvarHygva21740312730
Hlur1318770022640 hygrohypnum_luridum Hlur1318770022640
Hlur1318770022650 hygrohypnum_luridum Hlur1318770022650
Hlur1320580109120 hygrohypnum_luridum Hlur1320580109120
Hlur1320610116250 hygrohypnum_luridum Hlur1320610116250
Hlur1321000136290 hygrohypnum_luridum Hlur1321000136290
Hlur1321720190440 hygrohypnum_luridum Hlur1321720190440
Hcur1318770022640 hypnum_curvifolium Hcur1318770022640
Hcur1318770022650 hypnum_curvifolium Hcur1318770022650
Hcur1320580109120 hypnum_curvifolium Hcur1320580109120
Hcur1320610116250 hypnum_curvifolium Hcur1320610116250
Hcur1321000136290 hypnum_curvifolium Hcur1321000136290
Hcur1321720013310 hypnum_curvifolium Hcur1321720013310
Hela478690124700 hypopterygium_elatum Hela478690124700
Hela479400178220 hypopterygium_elatum Hela479400178220
Hela479650203900 hypopterygium_elatum Hela479650203900
Hela479650203930 hypopterygium_elatum Hela479650203930
Hjapcontig_10180004710 hypopterygium_japonicum Hjapcontig_10180004710