PlantSME Plant secondary metabolism enzyme database
TDC

TDC

Atlas summary family TDC.

Lineage Coverage
Detected in 29 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Miscanthus lutarioriparius
Chrysanthemum seticuspe
Zoysia matrella
Aegilops tauschii
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 33 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Hjapcontig_4110160940 hypopterygium_japonicum Hjapcontig_4110160940
Hjapcontig_4110160980 hypopterygium_japonicum Hjapcontig_4110160980
Hjapcontig_9030318440 hypopterygium_japonicum Hjapcontig_9030318440
Hjapcontig_9080321480 hypopterygium_japonicum Hjapcontig_9080321480
ilex_asprella_Ilex_004007-T1 ilex_asprella ilex_asprella_Ilex_004007-T1
ilex_asprella_Ilex_038358-T1 ilex_asprella ilex_asprella_Ilex_038358-T1
ilex_asprella_Ilex_046910-T1 ilex_asprella ilex_asprella_Ilex_046910-T1
ilex_latifolia_GWHPBIST007296 ilex_latifolia ilex_latifolia_GWHPBIST007296
ilex_latifolia_GWHPBIST015827 ilex_latifolia ilex_latifolia_GWHPBIST015827
ilex_latifolia_GWHPBIST015829 ilex_latifolia ilex_latifolia_GWHPBIST015829
ilex_latifolia_GWHPBIST031858 ilex_latifolia ilex_latifolia_GWHPBIST031858
ilex_latifolia_GWHPBIST031861 ilex_latifolia ilex_latifolia_GWHPBIST031861
iochroma_cyaneum_IC03g017180.1 iochroma_cyaneum iochroma_cyaneum_IC03g017180.1
iochroma_cyaneum_IC08g012980.1 iochroma_cyaneum iochroma_cyaneum_IC08g012980.1
iochroma_cyaneum_IC08g022430.1 iochroma_cyaneum iochroma_cyaneum_IC08g022430.1
iochroma_cyaneum_IC08g025730.1 iochroma_cyaneum iochroma_cyaneum_IC08g025730.1
iochroma_cyaneum_IC11g017470.1 iochroma_cyaneum iochroma_cyaneum_IC11g017470.1
Itrk_sc0000858.1_g000013.1 ipomoea_batatas Itrk_sc0000858.1_g000013.1
Itrk_sc0001755.1_g000008.1 ipomoea_batatas Itrk_sc0001755.1_g000008.1
Itrk_sc0002081.1_g000007.1 ipomoea_batatas Itrk_sc0002081.1_g000007.1
Itrk_sc0002158.1_g000003.1 ipomoea_batatas Itrk_sc0002158.1_g000003.1
Itrk_sc0011636.1_g000002.1 ipomoea_batatas Itrk_sc0011636.1_g000002.1
Itrk_sc0020750.1_g000001.1 ipomoea_batatas Itrk_sc0020750.1_g000001.1
Itrk_sc0060667.1_g000001.1 ipomoea_batatas Itrk_sc0060667.1_g000001.1
ipomoea_trifida_itf05g11430.t1 ipomoea_trifida ipomoea_trifida_itf05g11430.t1
ipomoea_trifida_itf07g05640.t1 ipomoea_trifida ipomoea_trifida_itf07g05640.t1
ipomoea_trifida_itf07g05650.t1 ipomoea_trifida ipomoea_trifida_itf07g05650.t1
Itril05G0007390.1 ipomoea_triloba Itril05G0007390.1
Itril07G0005290.1 ipomoea_triloba Itril07G0005290.1
Itril07G0005300.1 ipomoea_triloba Itril07G0005300.1